RNA–Protein interactions for RNA: ENST00000619485.4

TP53-225, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,506 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-225ENST00000619485 PLA2G4DQ86XP0 818 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 TRMT1Q9NXH9 659 aaKnown RBP12.14□□□□□ -0.47
TP53-225ENST00000619485 HMG20BQ9P0W2 317 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 ZBTB1Q9Y2K1 713 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 SLIT2O94813 1529 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 DOT1LQ8TEK3 1739 aa12.14□□□□□ -0.47
TP53-225ENST00000619485 KCNQ2O43526 872 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 CHST3Q7LGC8 479 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 CCAR1Q8IX12 1150 aaKnown RBP12.13□□□□□ -0.47
TP53-225ENST00000619485 TIMM10P62072 90 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 SCRN1Q12765 414 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 TDRD7Q8NHU6 1098 aaKnown RBP12.13□□□□□ -0.47
TP53-225ENST00000619485 CFAP45Q9UL16 551 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 TBC1D2BQ9UPU7 963 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 MED23Q9ULK4 1368 aa12.13□□□□□ -0.47
TP53-225ENST00000619485 USP27XA6NNY8 438 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 CYP21A2P08686 494 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 ME1P48163 572 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 RESTQ13127 1097 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 KRT32Q14532 448 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 ATG9AQ7Z3C6 839 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 ANKRD7Q92527 254 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 NCOA5Q9HCD5 579 aaKnown RBP12.12□□□□□ -0.47
TP53-225ENST00000619485 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 H7C1W4 665 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 NPHP1O15259 732 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 CTIFO43310 598 aaKnown RBP12.12□□□□□ -0.47
TP53-225ENST00000619485 APOBRQ0VD83 1088 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 CEP135Q66GS9 1140 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 NEUROD6Q96NK8 337 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 PHLPP1O60346 1717 aa12.12□□□□□ -0.47
TP53-225ENST00000619485 COL14A1Q05707 1796 aaKnown RBP12.11□□□□□ -0.47
TP53-225ENST00000619485 CCDC73Q6ZRK6 1079 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 MARCH10Q8NA82 808 aaPredicted RBP12.11□□□□□ -0.47
TP53-225ENST00000619485 COL4A1P02462 1669 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 SNAP23O00161 211 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 KINO60870 393 aaKnown RBP12.11□□□□□ -0.47
TP53-225ENST00000619485 SKILP12757 684 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 RABL6Q3YEC7 729 aaPredicted RBP12.11□□□□□ -0.47
TP53-225ENST00000619485 TNNI3KQ59H18 835 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 GOLPH3LQ9H4A5 285 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 FPGT-TNNI3KV9GXZ4 949 aa12.11□□□□□ -0.47
TP53-225ENST00000619485 ADORA1P30542 326 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 HSP90AB3PQ58FF7 597 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 PI16Q6UXB8 463 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.1□□□□□ -0.47
TP53-225ENST00000619485 CWC25Q9NXE8 425 aaPredicted RBP12.1□□□□□ -0.47
TP53-225ENST00000619485 BCL9O00512 1426 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 PTPDC1A2A3K4 754 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 STX1AQ16623 288 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 RBM43Q6ZSC3 357 aaKnown RBP12.1□□□□□ -0.47
TP53-225ENST00000619485 LRRC8AQ8IWT6 810 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 USP28Q96RU2 1077 aa12.1□□□□□ -0.47
TP53-225ENST00000619485 ZSCAN16Q9H4T2 348 aaPredicted RBP12.1□□□□□ -0.47
TP53-225ENST00000619485 AHDC1Q5TGY3 1603 aaPredicted RBP12.1□□□□□ -0.47
TP53-225ENST00000619485 GOLIM4O00461 696 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
TP53-225ENST00000619485 MCMDC2Q4G0Z9 681 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 UTP14CQ5TAP6 766 aaKnown RBP12.09□□□□□ -0.47
TP53-225ENST00000619485 AOPEPQ8N6M6 819 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 FSIP1Q8NA03 581 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 WNK3Q9BYP7 1800 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 NRAPQ86VF7 1730 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 ZNF609O15014 1411 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 PTPN14Q15678 1187 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 ZRSR1Q15695 479 aaKnown RBP12.09□□□□□ -0.47
TP53-225ENST00000619485 STOX1Q6ZVD7 989 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 ZNF771Q7L3S4 317 aaPredicted RBP12.09□□□□□ -0.47
TP53-225ENST00000619485 SLC51AQ86UW1 340 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 COPRSQ9NQ92 184 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 SNRKQ9NRH2 765 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 PAXBP1Q9Y5B6 917 aa12.09□□□□□ -0.47
TP53-225ENST00000619485 CCDC69A6NI79 296 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 ITPK1Q13572 414 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 IQCB1Q15051 598 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 RAB11FIP4Q86YS3 637 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 TMEM51Q9NW97 253 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 COL22A1Q8NFW1 1626 aaPredicted RBP12.08□□□□□ -0.48
TP53-225ENST00000619485 UBN2Q6ZU65 1347 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 ATP5JP18859 108 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 SCARF1Q14162 830 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
TP53-225ENST00000619485 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
TP53-225ENST00000619485 SPATA31A1Q5TZJ5 1347 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 MYH14Q7Z406 1995 aaKnown RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 A0A1B0GVL5 298 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 EXOC5O00471 708 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 BIN1O00499 593 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 TSGA10IPQ3SY00 556 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 OTUD7BQ6GQQ9 843 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.07□□□□□ -0.48
TP53-225ENST00000619485 GTPBP4Q9BZE4 634 aaKnown RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 WTIPA6NIX2 430 aaPredicted RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 SMC2O95347 1197 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 SF3A1Q15459 793 aaKnown RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 FAM98CQ17RN3 349 aaKnown RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 USPL1Q5W0Q7 1092 aa12.07□□□□□ -0.48
TP53-225ENST00000619485 ALDH8A1Q9H2A2 487 aaPredicted RBP12.07□□□□□ -0.48
TP53-225ENST00000619485 ZNF215Q9UL58 517 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms