RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 MROH5Q6ZUA9 1318 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 PTPDC1A2A3K4 754 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 H3BQV1 296 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 APPP05067 770 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 PDIA3P30101 505 aaKnown RBP16.43■□□□□ 0.22
CBWD1-226ENST00000618061 GUCY1B3Q02153 619 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 C3orf67Q6ZVT6 689 aa16.43■□□□□ 0.22
CBWD1-226ENST00000618061 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.43■□□□□ 0.22
CBWD1-226ENST00000618061 PRKCSHP14314 528 aaPredicted RBP16.42■□□□□ 0.22
CBWD1-226ENST00000618061 BCAMP50895 628 aa16.42■□□□□ 0.22
CBWD1-226ENST00000618061 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
CBWD1-226ENST00000618061 IQSEC3Q9UPP2 1182 aaPredicted RBP16.42■□□□□ 0.22
CBWD1-226ENST00000618061 ABCC12Q96J65 1359 aa16.42■□□□□ 0.22
CBWD1-226ENST00000618061 ESPNB1AK53 854 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 ZNF213O14771 459 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 TOM1O60784 492 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 PDE6AP16499 860 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 ARID4AP29374 1257 aaPredicted RBP16.41■□□□□ 0.22
CBWD1-226ENST00000618061 CEBPZQ03701 1054 aaKnown RBP16.41■□□□□ 0.22
CBWD1-226ENST00000618061 RASGRF1Q13972 1273 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 TICAM2Q86XR7 235 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 SMARCC2Q8TAQ2 1214 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 NBPF3Q9H094 633 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 CTNNA3Q9UI47 895 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 PRC1O43663 620 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 LIG1P18858 919 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 RESTQ13127 1097 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 SPATA5Q8NB90 893 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 LRP5O75197 1615 aa16.41■□□□□ 0.22
CBWD1-226ENST00000618061 PHF14O94880 888 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 SLC5A1P13866 664 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 ANTXR2P58335 489 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 CSPP1Q1MSJ5 1256 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 ERFEQ4G0M1 354 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 CCDC152Q4G0S7 254 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 ZNF512BQ96KM6 892 aaPredicted RBP16.4■□□□□ 0.22
CBWD1-226ENST00000618061 SPATA32Q96LK8 384 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 FTOQ9C0B1 505 aaKnown RBP eCLIP16.4■□□□□ 0.22
CBWD1-226ENST00000618061 RREB1Q92766 1687 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 TCRBV5S4A2TA0A5A2 114 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 TTF1Q15361 905 aaPredicted RBP16.4■□□□□ 0.22
CBWD1-226ENST00000618061 CAMK4Q16566 473 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 PARP10Q53GL7 1025 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 TBC1D10CQ8IV04 446 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 MB21D2Q8IYB1 491 aaPredicted RBP16.4■□□□□ 0.22
CBWD1-226ENST00000618061 CCDC24Q8N4L8 307 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 MAGEB6Q8N7X4 407 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 TAOK2Q9UL54 1235 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 EP400Q96L91 3159 aa16.4■□□□□ 0.22
CBWD1-226ENST00000618061 UBAP1LF5GYI3 381 aa16.39■□□□□ 0.21
CBWD1-226ENST00000618061 IGHMBP2P38935 993 aaKnown RBP16.39■□□□□ 0.21
CBWD1-226ENST00000618061 CHRNDQ07001 517 aa16.39■□□□□ 0.21
CBWD1-226ENST00000618061 LEO1Q8WVC0 666 aaPredicted RBP16.39■□□□□ 0.21
CBWD1-226ENST00000618061 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 AK7Q96M32 723 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 COL5A3P25940 1745 aaPredicted RBP16.38■□□□□ 0.21
CBWD1-226ENST00000618061 KLF18A0A0U1RQI7 1052 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 OTUD7BQ6GQQ9 843 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
CBWD1-226ENST00000618061 STK11IPQ8N1F8 1099 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 NCOA7Q8NI08 942 aa16.38■□□□□ 0.21
CBWD1-226ENST00000618061 SMARCC1Q92922 1105 aaPredicted RBP16.38■□□□□ 0.21
CBWD1-226ENST00000618061 ZNF274Q96GC6 653 aaPredicted RBP16.38■□□□□ 0.21
CBWD1-226ENST00000618061 ARAP2Q8WZ64 1704 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 MCM5P33992 734 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 UBE3CQ15386 1083 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 CYB5R4Q7L1T6 521 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 AIDAQ96BJ3 306 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
CBWD1-226ENST00000618061 ARMT1Q9H993 441 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 GJB4Q9NTQ9 266 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 BCL9LQ86UU0 1499 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 FDPSP14324 419 aaKnown RBP16.37■□□□□ 0.21
CBWD1-226ENST00000618061 RXRAP19793 462 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 PGBD1Q96JS3 809 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 PDLIM2Q96JY6 352 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 SENP2Q9HC62 589 aa16.37■□□□□ 0.21
CBWD1-226ENST00000618061 SRP68Q9UHB9 627 aaKnown RBP16.37■□□□□ 0.21
CBWD1-226ENST00000618061 GOLGA8BA8MQT2 603 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 PRKAB2O43741 272 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 KDM4AO75164 1064 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 MBD4O95243 580 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 TBC1D9BQ66K14 1250 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 MPNDQ8N594 471 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 STRBPQ96SI9 672 aaKnown RBP16.36■□□□□ 0.21
CBWD1-226ENST00000618061 HPS5Q9UPZ3 1129 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 SALL1Q9NSC2 1324 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 B4E1Z4 1266 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 CTDSPL2Q05D32 466 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 AMIGO3Q86WK7 504 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
CBWD1-226ENST00000618061 EPB41L4AQ9HCS5 686 aaPredicted RBP16.36■□□□□ 0.21
CBWD1-226ENST00000618061 ZNF652Q9Y2D9 606 aa16.36■□□□□ 0.21
CBWD1-226ENST00000618061 CARMIL3Q8ND23 1372 aa16.35■□□□□ 0.21
CBWD1-226ENST00000618061 GOLGA6L4A6NEF3 574 aa16.35■□□□□ 0.21
CBWD1-226ENST00000618061 PDIA4P13667 645 aaKnown RBP16.35■□□□□ 0.21
CBWD1-226ENST00000618061 GYG1P46976 350 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms