RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 STOX1Q6ZVD7 989 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 NEURL1BA8MQ27 555 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 GCKRQ14397 625 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 NRXN3Q9Y4C0 1643 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 CPLX1O14810 134 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 ATP1A3P13637 1013 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 KARSQ15046 597 aaKnown RBP15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 WWC2Q6AWC2 1192 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 SARM1Q6SZW1 724 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 NBPF11Q86T75 865 aa15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 PUF60Q9UHX1 559 aaKnown RBP15.49■□□□□ 0.07
PCDHA11-202ENST00000616325 RESTQ13127 1097 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 MCMDC2Q4G0Z9 681 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 CCDC102AQ96A19 550 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 DDX21Q9NR30 783 aaKnown RBP eCLIP15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 CTAGE5O15320 804 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 ATP2B1P20020 1258 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 L2HGDHQ9H9P8 463 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 ZNF790Q6PG37 636 aa15.48■□□□□ 0.07
PCDHA11-202ENST00000616325 EPB41L2O43491 1005 aaKnown RBP15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 TBC1D8O95759 1140 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 APPP05067 770 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 KRT32Q14532 448 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 CCDC150Q8NCX0 1101 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 FOXR1Q6PIV2 292 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 CREBRFQ8IUR6 639 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 CCDC82Q8N4S0 544 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 PARD6BQ9BYG5 372 aa15.47■□□□□ 0.07
PCDHA11-202ENST00000616325 ZRANB2O95218 330 aaKnown RBP eCLIP15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 NOM1Q5C9Z4 860 aaKnown RBP15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 CC2D1AQ6P1N0 951 aaPredicted RBP15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 RBM43Q6ZSC3 357 aaKnown RBP15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 COL15A1P39059 1388 aa15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 UBASH3AP57075 661 aa15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 PDE11AQ9HCR9 933 aa15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 HMG20BQ9P0W2 317 aa15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 TECPR2O15040 1411 aa15.46■□□□□ 0.07
PCDHA11-202ENST00000616325 FAM160A1Q05DH4 1040 aa15.46■□□□□ 0.06
PCDHA11-202ENST00000616325 MTX1Q13505 466 aa15.46■□□□□ 0.06
PCDHA11-202ENST00000616325 PPP2R3AQ06190 1150 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 NSUN7Q8NE18 718 aaKnown RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 TBX22Q9Y458 520 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 U3KPZ7 1027 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 PTPN12Q05209 780 aaKnown RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 LRRFIP1Q32MZ4 808 aaKnown RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 RGS22Q8NE09 1264 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 RABEP2Q9H5N1 569 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 SPATA31D1Q6ZQQ2 1576 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 TADA3O75528 432 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 SLC3A2P08195 630 aaKnown RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 NDUFA8P51970 172 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 FANCCQ00597 558 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 TTC31Q49AM3 519 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 CCDC12Q8WUD4 166 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 DESI2Q9BSY9 194 aa15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 RNF216Q9NWF9 866 aaPredicted RBP15.45■□□□□ 0.06
PCDHA11-202ENST00000616325 IFIT1P09914 478 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 AMOTQ4VCS5 1084 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 SYNE3Q6ZMZ3 975 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 SRLQ86TD4 932 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 WDR24Q96S15 920 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 EFCC1Q9HA90 598 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 CLIC4Q9Y696 253 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 PLEKHG1Q9ULL1 1385 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 GOLGA8BA8MQT2 603 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 TOP1P11387 765 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 LRRC24Q50LG9 513 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 SPECC1Q5M775 1068 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 DHX32Q7L7V1 743 aaKnown RBP15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 FBXO18Q8NFZ0 1043 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 PAG1Q9NWQ8 432 aa15.44■□□□□ 0.06
PCDHA11-202ENST00000616325 EFCAB8A8MWE9 144 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 RHOXF2BP0C7M4 288 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 ZNF396Q96N95 335 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 AIFM3Q96NN9 605 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 RHOXF2Q9BQY4 288 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 IRX2Q9BZI1 471 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 ZSCAN16Q9H4T2 348 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 BABAM1Q9NWV8 329 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 PSDA5PKW4 1024 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 H3BQF6 201 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 N4BP1O75113 896 aaKnown RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 HOXB7P09629 217 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 FAM193AP78312 1265 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 LONRF2Q1L5Z9 754 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 ICE2Q659A1 982 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 GOLGA5Q8TBA6 731 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 C8orf76Q96K31 380 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 LZTFL1Q9NQ48 299 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 PCDHA7Q9UN72 937 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 JRKLQ9Y4A0 524 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 CEMIPQ8WUJ3 1361 aa15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 NPHP4O75161 1426 aaPredicted RBP15.43■□□□□ 0.06
PCDHA11-202ENST00000616325 CTDNEP1O95476 244 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms