RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 PCCAP05165 728 aaPredicted RBP16.24■□□□□ 0.19
SSBP2-220ENST00000615665 CATIPQ7Z7H3 387 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 ANKRD18AQ8IVF6 992 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 PRIMPOLQ96LW4 560 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 PUS3Q9BZE2 481 aaKnown RBP16.24■□□□□ 0.19
SSBP2-220ENST00000615665 SH3TC1Q8TE82 1336 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
SSBP2-220ENST00000615665 PTPN14Q15678 1187 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 SLIT1O75093 1534 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
SSBP2-220ENST00000615665 C1orf167Q5SNV9 1468 aa16.24■□□□□ 0.19
SSBP2-220ENST00000615665 IPO7O95373 1038 aaKnown RBP16.23■□□□□ 0.19
SSBP2-220ENST00000615665 MARCKSP29966 332 aaPredicted RBP16.23■□□□□ 0.19
SSBP2-220ENST00000615665 RTN1Q16799 776 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 ZBTB38Q8NAP3 1195 aaPredicted RBP16.23■□□□□ 0.19
SSBP2-220ENST00000615665 CIAO1O76071 339 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 TNNT1P13805 278 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 RXRAP19793 462 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 ISM2Q6H9L7 571 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 PFKFB2O60825 505 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 LIG1P18858 919 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 GSDMDP57764 484 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 DZIP1Q86YF9 867 aaKnown RBP16.23■□□□□ 0.19
SSBP2-220ENST00000615665 TMTC2Q8N394 836 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 FBXO3Q9UK99 471 aa16.23■□□□□ 0.19
SSBP2-220ENST00000615665 DYNC1I1O14576 645 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 ZMYM1Q5SVZ6 1142 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 CCDC102BQ68D86 513 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 AOPEPQ8N6M6 819 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 TRIM34Q9BYJ4 488 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 MBD4O95243 580 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 GNAT2P19087 354 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 TTLL5Q6EMB2 1281 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 ARHGAP23Q9P227 1491 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 H7C1W4 665 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
SSBP2-220ENST00000615665 UBR1Q8IWV7 1749 aa16.22■□□□□ 0.19
SSBP2-220ENST00000615665 B4E1Z4 1266 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 ESR2Q92731 530 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.19
SSBP2-220ENST00000615665 PTGS1P23219 599 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 USP5P45974 858 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 ARGLU1Q9NWB6 273 aaPredicted RBP16.21■□□□□ 0.19
SSBP2-220ENST00000615665 ASAP1Q9ULH1 1129 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 CTSWP56202 376 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 OTUD7BQ6GQQ9 843 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 TMC6Q7Z403 805 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
SSBP2-220ENST00000615665 MON2Q7Z3U7 1717 aa16.21■□□□□ 0.19
SSBP2-220ENST00000615665 MIGA1Q8NAN2 632 aa16.21■□□□□ 0.18
SSBP2-220ENST00000615665 LPIN2Q92539 896 aa16.21■□□□□ 0.18
SSBP2-220ENST00000615665 SALL3Q9BXA9 1300 aa16.21■□□□□ 0.18
SSBP2-220ENST00000615665 IL25Q9H293 177 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 A0A1B0GVL5 298 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 KIF2AO00139 706 aaPredicted RBP16.2■□□□□ 0.18
SSBP2-220ENST00000615665 CBX8Q9HC52 389 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 MAP3K15Q6ZN16 1313 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 ADORA1P30542 326 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 NGLY1Q96IV0 654 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 TRMT1Q9NXH9 659 aaKnown RBP16.2■□□□□ 0.18
SSBP2-220ENST00000615665 ANKIB1Q9P2G1 1089 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 TNS3Q68CZ2 1445 aa16.2■□□□□ 0.18
SSBP2-220ENST00000615665 SCRN1Q12765 414 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 PARP10Q53GL7 1025 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 SMARCE1Q969G3 411 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 TMEM87BQ96K49 555 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 ATG3Q9NT62 314 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 C3P01024 1663 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 BRINP3Q76B58 766 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 TMEM87AQ8NBN3 555 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 MKNK2Q9HBH9 465 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 MAST3O60307 1309 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 ZNF532Q9HCE3 1301 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
SSBP2-220ENST00000615665 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
SSBP2-220ENST00000615665 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.18■□□□□ 0.18
SSBP2-220ENST00000615665 GIGYF2Q6Y7W6 1299 aaKnown RBP16.18■□□□□ 0.18
SSBP2-220ENST00000615665 MAGEB6P1A0A0J9YX57 407 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 PDCL2Q8N4E4 241 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 ELP1O95163 1332 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 NBPF5PQ86XG9 351 aaPredicted RBP16.18■□□□□ 0.18
SSBP2-220ENST00000615665 KIF18AQ8NI77 898 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 CDCA7Q9BWT1 371 aaPredicted RBP16.18■□□□□ 0.18
SSBP2-220ENST00000615665 MROH5Q6ZUA9 1318 aa16.18■□□□□ 0.18
SSBP2-220ENST00000615665 FGAP02671 866 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 KLHL10Q6JEL2 608 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 FAM177A1Q8N128 213 aaPredicted RBP16.17■□□□□ 0.18
SSBP2-220ENST00000615665 ARMT1Q9H993 441 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 CCDC87Q9NVE4 849 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 FER1L4A9Z1Z3 1794 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 SOGA3Q5TF21 947 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 NR1I2O75469 434 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 NLRP5P59047 1200 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 CRNKL1Q9BZJ0 848 aaKnown RBP16.17■□□□□ 0.18
SSBP2-220ENST00000615665 GREM2Q9H772 168 aa16.17■□□□□ 0.18
SSBP2-220ENST00000615665 KNDC1Q76NI1 1749 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms