RNA–Protein interactions for RNA: ENST00000615497.4

TBC1D1-219, Transcript of TBC1 domain family member 1, humanhuman

TSL 2 BASIC

Gene TBC1D1, Length 2,383 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D1-219ENST00000615497 LRRC4BQ9NT99 713 aa18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 RTCBQ9Y3I0 505 aaKnown RBP18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 PDE6AP16499 860 aa18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 STK3Q13188 491 aa18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 UBE3CQ15386 1083 aa18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 AGXT2Q9BYV1 514 aa18.41■□□□□ 0.54
TBC1D1-219ENST00000615497 BRF1Q92994 677 aa18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 CDC5LQ99459 802 aaKnown RBP18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 ZNF532Q9HCE3 1301 aa18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 COL24A1Q17RW2 1714 aa18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 HMGB1P09429 215 aaKnown RBP18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 SETDB2Q96T68 719 aa18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 BRPF3Q9ULD4 1205 aa18.4■□□□□ 0.54
TBC1D1-219ENST00000615497 GOLGA6L3A6NEY3 463 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 ZPR1O75312 459 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 HAND2P61296 217 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 CCDC24Q8N4L8 307 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 GTF3C6Q969F1 213 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 GDPD2Q9HCC8 539 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 BSDC1Q9NW68 430 aaPredicted RBP18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 F13A1P00488 732 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 ZSCAN25Q6NSZ9 544 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 ANKRD18AQ8IVF6 992 aa18.39■□□□□ 0.53
TBC1D1-219ENST00000615497 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 CHST3Q7LGC8 479 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 NBPF3Q9H094 633 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 MINPP1Q9UNW1 487 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 A0A1B0GUL6 1792 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 BCL11BQ9C0K0 894 aaPredicted RBP18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 QTRT2Q9H974 415 aaKnown RBP18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 PODXL2Q9NZ53 605 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
TBC1D1-219ENST00000615497 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 GTF2E1P29083 439 aaPredicted RBP18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 CAVIN1Q6NZI2 390 aaKnown RBP18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 FAM196AQ6ZSG2 479 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 NBPF5PQ86XG9 351 aaPredicted RBP18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 C4AP0C0L4 1744 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 JAK2O60674 1132 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 SCRN1Q12765 414 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 NKX2-3Q8TAU0 364 aa18.37■□□□□ 0.53
TBC1D1-219ENST00000615497 ZNF804BA4D1E1 1349 aa18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 APOBRQ0VD83 1088 aa18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 USP48Q86UV5 1035 aa18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 STRBPQ96SI9 672 aaKnown RBP18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 NYXQ9GZU5 481 aa18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 GPHNQ9NQX3 736 aaPredicted RBP18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 RBM27Q9P2N5 1060 aaKnown RBP18.36■□□□□ 0.53
TBC1D1-219ENST00000615497 GADD45BO75293 160 aaPredicted RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 PHF14O94880 888 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 NCLP19338 710 aaKnown RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 TM4SF1P30408 202 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 IMMTQ16891 758 aaKnown RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 LARP1BQ659C4 914 aaKnown RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 CNPY2Q9Y2B0 182 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 PFKFB2O60825 505 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 GYG1P46976 350 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 L1TD1Q5T7N2 865 aaKnown RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 FBXL16Q8N461 479 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 MAGEB6Q8N7X4 407 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 DENND2AQ9ULE3 1009 aa18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 IQSEC3Q9UPP2 1182 aaPredicted RBP18.35■□□□□ 0.53
TBC1D1-219ENST00000615497 TPTE2Q6XPS3 522 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 CDC37L1Q7L3B6 337 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 MB21D2Q8IYB1 491 aaPredicted RBP18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 TMEM87AQ8NBN3 555 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 NLRP3Q96P20 1036 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 TMEM63CQ9P1W3 806 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 COL1A1P02452 1464 aaPredicted RBP18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 CTDNEP1O95476 244 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 UBE4AQ14139 1066 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 ZSCAN23Q3MJ62 389 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 TRAPPC3LQ5T215 181 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 PANK2Q9BZ23 570 aa18.34■□□□□ 0.53
TBC1D1-219ENST00000615497 VPS37CA5D8V6 355 aaPredicted RBP18.33■□□□□ 0.53
TBC1D1-219ENST00000615497 ANTXR2P58335 489 aa18.33■□□□□ 0.53
TBC1D1-219ENST00000615497 RPS8P62241 208 aaKnown RBP18.33■□□□□ 0.53
TBC1D1-219ENST00000615497 MAP3K12Q12852 859 aa18.33■□□□□ 0.53
TBC1D1-219ENST00000615497 RFC4P35249 363 aa18.33■□□□□ 0.52
TBC1D1-219ENST00000615497 EVCP57679 992 aa18.33■□□□□ 0.52
TBC1D1-219ENST00000615497 FGD1P98174 961 aa18.33■□□□□ 0.52
TBC1D1-219ENST00000615497 ZNF213O14771 459 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 KLRK1P26718 216 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 PDIA3P30101 505 aaKnown RBP18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 DNM1Q05193 864 aaKnown RBP18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 NFIXQ14938 502 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 TBC1D10CQ8IV04 446 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 SMARCC2Q8TAQ2 1214 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 FAM84BQ96KN1 310 aaPredicted RBP18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 ZMYND15Q9H091 742 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 GRPEL1Q9HAV7 217 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 EPB41L4AQ9HCS5 686 aaPredicted RBP18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 ZNF445P59923 1031 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 SLC51AQ86UW1 340 aa18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 ISY1Q9ULR0 285 aaKnown RBP18.32■□□□□ 0.52
TBC1D1-219ENST00000615497 MBD4O95243 580 aa18.31■□□□□ 0.52
TBC1D1-219ENST00000615497 MRE11P49959 708 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms