RNA–Protein interactions for RNA: ENST00000613776.1

ACACA-229, Transcript of acetyl-CoA carboxylase alpha, human

TSL 2

Gene ACACA, Length 1,372 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACACA-229	ENST00000613776	COL1A1	P02452	1464 aa	Predicted RBP	13.59	□□□□□ -0.23
ACACA-229	ENST00000613776	U2SURP	O15042	1029 aa	Known RBP	13.58	□□□□□ -0.23
ACACA-229	ENST00000613776	FMNL1	O95466	1100 aa	Predicted RBP	13.58	□□□□□ -0.23
ACACA-229	ENST00000613776	MYLIP	Q8WY64	445 aa		13.58	□□□□□ -0.23
ACACA-229	ENST00000613776	PHACTR3	Q96KR7	559 aa		13.58	□□□□□ -0.23
ACACA-229	ENST00000613776	DEFB118	Q96PH6	123 aa		13.58	□□□□□ -0.23
ACACA-229	ENST00000613776	GTF2A2	P52657	109 aa		13.58	□□□□□ -0.24
ACACA-229	ENST00000613776	DCTN1	Q14203	1278 aa		13.58	□□□□□ -0.24
ACACA-229	ENST00000613776	NBPF12	Q5TAG4	269 aa	Predicted RBP	13.58	□□□□□ -0.24
ACACA-229	ENST00000613776	PODN	Q7Z5L7	613 aa		13.58	□□□□□ -0.24
ACACA-229	ENST00000613776	RTF1	Q92541	710 aa	Known RBP	13.58	□□□□□ -0.24
ACACA-229	ENST00000613776	RPS8	P62241	208 aa	Known RBP	13.57	□□□□□ -0.24
ACACA-229	ENST00000613776	SUPT20HL1	Q3ZLR7	823 aa		13.57	□□□□□ -0.24
ACACA-229	ENST00000613776	DACT2	Q5SW24	774 aa		13.57	□□□□□ -0.24
ACACA-229	ENST00000613776	THUMPD2	Q9BTF0	503 aa	Known RBP	13.57	□□□□□ -0.24
ACACA-229	ENST00000613776	ALYREF	Q86V81	257 aa	Known RBP	13.56	□□□□□ -0.24
ACACA-229	ENST00000613776	CPA4	Q9UI42	421 aa		13.56	□□□□□ -0.24
ACACA-229	ENST00000613776	FOSL2	P15408	326 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	MDM2	Q00987	491 aa	Predicted RBP	13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	PRKCZ	Q05513	592 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	SF3B3	Q15393	1217 aa	Known RBP	13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	KIAA0825	Q8IV33	1275 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	SLAIN1	Q8ND83	568 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	ZBED3	Q96IU2	234 aa	Predicted RBP	13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	SEMA6B	Q9H3T3	888 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	PPP2R3B	Q9Y5P8	575 aa		13.55	□□□□□ -0.24
ACACA-229	ENST00000613776	FAM205A	Q6ZU69	1335 aa		13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	BTBD19	C9JJ37	291 aa		13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	TAF7	Q15545	349 aa	Predicted RBP	13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	C17orf99	Q6UX52	265 aa		13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	HELB	Q8NG08	1087 aa	Predicted RBP	13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	CRISPLD2	Q9H0B8	497 aa		13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	ARIH1	Q9Y4X5	557 aa	Predicted RBP	13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	LAMA2	P24043	3122 aa	Known RBP	13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	MYO3B	Q8WXR4	1341 aa		13.54	□□□□□ -0.24
ACACA-229	ENST00000613776	COL2A1	P02458	1487 aa	Predicted RBP	13.53	□□□□□ -0.24
ACACA-229	ENST00000613776	CAPN2	P17655	700 aa		13.53	□□□□□ -0.24
ACACA-229	ENST00000613776	HSP90AB3P	Q58FF7	597 aa		13.53	□□□□□ -0.24
ACACA-229	ENST00000613776	HCN4	Q9Y3Q4	1203 aa		13.53	□□□□□ -0.24
ACACA-229	ENST00000613776	OTOF	Q9HC10	1997 aa		13.52	□□□□□ -0.24
ACACA-229	ENST00000613776	ADCY3	O60266	1144 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	INHA	P05111	366 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	ELN	P15502	786 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	PRKAR2B	P31323	418 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	STRIP1	Q5VSL9	837 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	USP38	Q8NB14	1042 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	GABRQ	Q9UN88	632 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	TIMELESS	Q9UNS1	1208 aa		13.52	□□□□□ -0.25
ACACA-229	ENST00000613776	CLRN2	A0PK11	232 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	DLGAP5	Q15398	846 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	LRP10	Q7Z4F1	713 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	FAM89A	Q96GI7	184 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	PAK6	Q9NQU5	681 aa	Predicted RBP	13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	SEC31B	Q9NQW1	1179 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	KNSTRN	Q9Y448	316 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	ZNF804B	A4D1E1	1349 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	ADGRA2	Q96PE1	1338 aa		13.51	□□□□□ -0.25
ACACA-229	ENST00000613776	ANXA1	P04083	346 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	CETP	P11597	493 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	MMP14	P50281	582 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	VGLL4	Q14135	290 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	RTL5	Q5HYW3	569 aa	Predicted RBP	13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	ADAMTS19	Q8TE59	1207 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	C1QTNF1	Q9BXJ1	281 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	NBPF3	Q9H094	633 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	VEZT	Q9HBM0	779 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	ZCCHC17	Q9NP64	241 aa	Known RBP	13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	PCDHAC2	Q9Y5I4	1007 aa		13.5	□□□□□ -0.25
ACACA-229	ENST00000613776	EIF4A1	P60842	406 aa	Known RBP	13.49	□□□□□ -0.25
ACACA-229	ENST00000613776	AIMP1	Q12904	312 aa	Known RBP	13.49	□□□□□ -0.25
ACACA-229	ENST00000613776	TTYH1	Q9H313	450 aa	Predicted RBP	13.49	□□□□□ -0.25
ACACA-229	ENST00000613776	XDH	P47989	1333 aa		13.49	□□□□□ -0.25
ACACA-229	ENST00000613776	ATP2B4	P23634	1241 aa		13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	PDIA6	Q15084	440 aa		13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	PROSER3	Q2NL68	480 aa		13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	UHRF1	Q96T88	793 aa	Predicted RBP	13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	C11orf49	Q9H6J7	331 aa		13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	PIEZO1	Q92508	2521 aa		13.48	□□□□□ -0.25
ACACA-229	ENST00000613776	FCGRT	P55899	365 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	MAP3K9	P80192	1104 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	RASA3	Q14644	834 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	TTLL5	Q6EMB2	1281 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	ANKLE1	Q8NAG6	615 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	CACNA1A	O00555	2505 aa		13.47	□□□□□ -0.25
ACACA-229	ENST00000613776	MYO1B	O43795	1136 aa		13.46	□□□□□ -0.25
ACACA-229	ENST00000613776	FLT3LG	P49771	235 aa		13.46	□□□□□ -0.25
ACACA-229	ENST00000613776	COPS6	Q7L5N1	327 aa		13.46	□□□□□ -0.25
ACACA-229	ENST00000613776	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	13.46	□□□□□ -0.25
ACACA-229	ENST00000613776	CSAD	Q9Y600	493 aa		13.46	□□□□□ -0.25
ACACA-229	ENST00000613776	AOX1	Q06278	1338 aa		13.46	□□□□□ -0.26
ACACA-229	ENST00000613776	EIF2S2	P20042	333 aa	Known RBP	13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	SNAPC2	Q13487	334 aa		13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	RSPH6A	Q9H0K4	717 aa		13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	TAOK2	Q9UL54	1235 aa		13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	COL3A1	P02461	1466 aa	Predicted RBP	13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	MED23	Q9ULK4	1368 aa		13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	SPDYE5	A6NIY4	337 aa		13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	IRS4	O14654	1257 aa	Predicted RBP	13.45	□□□□□ -0.26
ACACA-229	ENST00000613776	IRF6	O14896	467 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms