RNA–Protein interactions for RNA: ENST00000612467.1

PCDHGA3-202, Transcript of protocadherin gamma subfamily A, 3, humanhuman

TSL 2

Gene PCDHGA3, Length 2,712 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-202ENST00000612467 APPBP2Q92624 585 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 AGXT2Q9BYV1 514 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 APPP05067 770 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 HMGB1P09429 215 aaKnown RBP16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 ANO6Q4KMQ2 910 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 SUSD4Q5VX71 490 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 FBXW7Q969H0 707 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 GOLPH3LQ9H4A5 285 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 DISP2A7MBM2 1401 aa16.57■□□□□ 0.24
PCDHGA3-202ENST00000612467 AKAP11Q9UKA4 1901 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 KLF18A0A0U1RQI7 1052 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 WTIPA6NIX2 430 aaPredicted RBP16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZNF500O60304 480 aaPredicted RBP16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 CCDC192P0DO97 292 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 IMMTQ16891 758 aaKnown RBP16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 TBC1D10CQ8IV04 446 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 CCDC144CPQ8IYA2 1237 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 NUP98P52948 1817 aa16.56■□□□□ 0.24
PCDHGA3-202ENST00000612467 POLR3DP05423 398 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 AIFM3Q96NN9 605 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 IQSEC3Q9UPP2 1182 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZNF532Q9HCE3 1301 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 SALL1Q9NSC2 1324 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 LRP6O75581 1613 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 NUTM2BA6NNL0 878 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 GOLGA8BA8MQT2 603 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 NUTM2EB1AL46 878 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 PDE8BO95263 885 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 NUTM2AQ8IVF1 878 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 MB21D2Q8IYB1 491 aaPredicted RBP16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 DNAJC25Q9H1X3 360 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 HPS5Q9UPZ3 1129 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 CARMIL3Q8ND23 1372 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 CDHR2Q9BYE9 1310 aa16.55■□□□□ 0.24
PCDHGA3-202ENST00000612467 UBE2Q2LH0YL09 131 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 ADD2P35612 726 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 CYB5R4Q7L1T6 521 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZNF213O14771 459 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 PDE8AO60658 829 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 MYL10Q9BUA6 226 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 CLSTN2Q9H4D0 955 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 CBX8Q9HC52 389 aa16.54■□□□□ 0.24
PCDHGA3-202ENST00000612467 ITPK1Q13572 414 aa16.53■□□□□ 0.24
PCDHGA3-202ENST00000612467 INTS5Q6P9B9 1019 aaKnown RBP16.53■□□□□ 0.24
PCDHGA3-202ENST00000612467 LLPHQ9BRT6 129 aaKnown RBP16.53■□□□□ 0.24
PCDHGA3-202ENST00000612467 KCNQ2O43526 872 aa16.53■□□□□ 0.24
PCDHGA3-202ENST00000612467 CCAR1Q8IX12 1150 aaKnown RBP16.53■□□□□ 0.24
PCDHGA3-202ENST00000612467 B4E1Z4 1266 aa16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 PDE6AP16499 860 aa16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 CRKLP46109 303 aaKnown RBP16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 RALYLQ86SE5 291 aaKnown RBP16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZNF274Q96GC6 653 aaPredicted RBP16.52■□□□□ 0.24
PCDHGA3-202ENST00000612467 ZFYP08048 801 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA3-202ENST00000612467 FAM200AQ8TCP9 573 aa16.52■□□□□ 0.23
PCDHGA3-202ENST00000612467 KCNF1Q9H3M0 494 aa16.52■□□□□ 0.23
PCDHGA3-202ENST00000612467 ZSCAN16Q9H4T2 348 aaPredicted RBP16.52■□□□□ 0.23
PCDHGA3-202ENST00000612467 TACC3Q9Y6A5 838 aa16.52■□□□□ 0.23
PCDHGA3-202ENST00000612467 KIF28PB7ZC32 967 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 PRKAB2O43741 272 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 MCM5P33992 734 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 NAA16Q6N069 864 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 MARCH10Q8NA82 808 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 NCOA7Q8NI08 942 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 CTNNA3Q9UI47 895 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 FBXO3Q9UK99 471 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 MYH3P11055 1940 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 MYH7P12883 1935 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 COL4A1P02462 1669 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 DOT1LQ8TEK3 1739 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 SMIM22K7EJ46 135 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 IL6STP40189 918 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 ME1P48163 572 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 BCAMP50895 628 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 HMGN5P82970 282 aaKnown RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 CTDSPL2Q05D32 466 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 CLIC4Q9Y696 253 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 NEDD4P46934 1319 aa16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 COL16A1Q07092 1604 aaPredicted RBP16.51■□□□□ 0.23
PCDHGA3-202ENST00000612467 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 C11orf57Q6ZUT1 292 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 MAGEB6Q8N7X4 407 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 ARMT1Q9H993 441 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 ORC3Q9UBD5 711 aaPredicted RBP16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 NRBP1Q9UHY1 535 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 CFAP45Q9UL16 551 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 RBM10P98175 930 aaKnown RBP16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 DDB1Q16531 1140 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 PHKBQ93100 1093 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 PYCARDQ9ULZ3 195 aa16.5■□□□□ 0.23
PCDHGA3-202ENST00000612467 KIAA2012Q0VF49 1180 aa16.49■□□□□ 0.23
PCDHGA3-202ENST00000612467 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms