RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 CSPP1Q1MSJ5 1256 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 SASS6Q6UVJ0 657 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 FTOQ9C0B1 505 aaKnown RBP eCLIP12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 FEZ2Q9UHY8 353 aaPredicted RBP12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
PCDHGC3-202ENST00000611950 PLSCR1O15162 318 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 TATP17735 454 aaPredicted RBP12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 VASPP50552 380 aaPredicted RBP12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 KCNB2Q92953 911 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 A0A0G2JLW4 131 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 CYP27B1O15528 508 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 TFCP2Q12800 502 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 CHST3Q7LGC8 479 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 DRC7Q8IY82 874 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 EXOC8Q8IYI6 725 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 BICD2Q8TD16 824 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 MAP4K1Q92918 833 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 COL18A1P39060 1754 aa12.53□□□□□ -0.4
PCDHGC3-202ENST00000611950 CSB-PGBD3P0DP91 1061 aa12.52□□□□□ -0.4
PCDHGC3-202ENST00000611950 KRT85P78386 507 aa12.52□□□□□ -0.4
PCDHGC3-202ENST00000611950 GUCY1B3Q02153 619 aa12.52□□□□□ -0.4
PCDHGC3-202ENST00000611950 ERCC4Q92889 916 aaPredicted RBP12.52□□□□□ -0.4
PCDHGC3-202ENST00000611950 METTL22Q9BUU2 404 aaPredicted RBP12.52□□□□□ -0.4
PCDHGC3-202ENST00000611950 NEXNQ0ZGT2 675 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 ZC3H12AQ5D1E8 599 aaKnown RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 FAM184AQ8NB25 1140 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 SPATA32Q96LK8 384 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 NEUROD6Q96NK8 337 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 DBNDD2Q9BQY9 259 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 DBNLQ9UJU6 430 aaKnown RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 ATF5Q9Y2D1 282 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 POLD1P28340 1107 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 IFNL2Q8IZJ0 200 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 MARCH10Q8NA82 808 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 NUP62CLQ9H1M0 184 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 KCNF1Q9H3M0 494 aa12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 SH2B1Q9NRF2 756 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 ZNF330Q9Y3S2 320 aaPredicted RBP12.52□□□□□ -0.41
PCDHGC3-202ENST00000611950 CCDC189A1A4V9 331 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 PTGS1P23219 599 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 TNNT3P45378 269 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 LRMPQ12912 555 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 ANO6Q4KMQ2 910 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 DNAJC21Q5F1R6 531 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 CCDC85AQ96PX6 553 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 TM6SF1Q9BZW5 370 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 MRC1P22897 1456 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 NR1I2O75469 434 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 MCM5P33992 734 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 ANKRD13DQ6ZTN6 518 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 PIBF1Q8WXW3 757 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 ZSCAN31Q96LW9 406 aaPredicted RBP12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 FUCA2Q9BTY2 467 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 TNMDQ9H2S6 317 aa12.51□□□□□ -0.41
PCDHGC3-202ENST00000611950 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 WDR17Q8IZU2 1322 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 RGL2O15211 777 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 CCDC192P0DO97 292 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 TDO2P48775 406 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 RAB11FIP4Q86YS3 637 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 BRF1Q92994 677 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 SNRKQ9NRH2 765 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 COL15A1P39059 1388 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 SNRPA1P09661 255 aaKnown RBP12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 RFX5P48382 616 aaPredicted RBP12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 TYRO3Q06418 890 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 MAP3K11Q16584 847 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 Q6ZUG5 572 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 PROM2Q8N271 834 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 CALCOCO1Q9P1Z2 691 aa12.5□□□□□ -0.41
PCDHGC3-202ENST00000611950 H3BQV1 296 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 MPHOSPH10O00566 681 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 KIF1CO43896 1103 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 PSMA5P28066 241 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 IFFO2Q5TF58 517 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 RNF20Q5VTR2 975 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 DCAF5Q96JK2 942 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 DNAJC25Q9H1X3 360 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 NCOA5Q9HCD5 579 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 MED23Q9ULK4 1368 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 CASZ1Q86V15 1759 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 WNK3Q9BYP7 1800 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 A0A087WZG4 1122 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 PTPN12Q05209 780 aaKnown RBP12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 TSPAN18Q96SJ8 248 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 STK32BQ9NY57 414 aa12.49□□□□□ -0.41
PCDHGC3-202ENST00000611950 TAF5LO75529 589 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 TIMM10P62072 90 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 TXNRD1Q16881 649 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 UVSSAQ2YD98 709 aa12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 ARHGEF1Q92888 912 aaKnown RBP12.48□□□□□ -0.41
PCDHGC3-202ENST00000611950 COPRSQ9NQ92 184 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms