RNA–Protein interactions for RNA: ENST00000609107.1

LINC02538-201, Transcript of long intergenic non-protein coding RNA 2538, humanhuman

TSL 2 BASIC

Gene LINC02538, Length 4,569 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02538-201ENST00000609107 CCDC12Q8WUD4 166 aaPredicted RBP16.42■□□□□ 0.22
LINC02538-201ENST00000609107 VWDEQ8N2E2 1590 aa16.42■□□□□ 0.22
LINC02538-201ENST00000609107 CBX1P83916 185 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 MAGEB6Q8N7X4 407 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 EDC3Q96F86 508 aaKnown RBP16.41■□□□□ 0.22
LINC02538-201ENST00000609107 TPCN1Q9ULQ1 816 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 RTL9Q8NET4 1388 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 CDR1P51861 262 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 HAUS7Q99871 368 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 GBP3Q9H0R5 595 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 NDUFB9Q9Y6M9 179 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
LINC02538-201ENST00000609107 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 GPAA1O43292 621 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 JAK2O60674 1132 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 SSBP05455 408 aaKnown RBP eCLIP16.41■□□□□ 0.22
LINC02538-201ENST00000609107 CCDC148Q8NFR7 591 aa16.41■□□□□ 0.22
LINC02538-201ENST00000609107 CALM1P0DP23 149 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 CALM2P0DP24 149 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 CALM3P0DP25 149 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 KIF4BQ2VIQ3 1234 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 NCOA5Q9HCD5 579 aaKnown RBP16.4■□□□□ 0.22
LINC02538-201ENST00000609107 ZC3H13Q5T200 1668 aaKnown RBP16.4■□□□□ 0.22
LINC02538-201ENST00000609107 USP31Q70CQ4 1352 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 TRIM75PA6NK02 468 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
LINC02538-201ENST00000609107 PPP4R3BQ5MIZ7 849 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 ZHX3Q9H4I2 956 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 DDB1Q16531 1140 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 CCDC178Q5BJE1 867 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 FKBP15Q5T1M5 1219 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 CCDC181Q5TID7 509 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 ANGEL1Q9UNK9 670 aaKnown RBP16.4■□□□□ 0.22
LINC02538-201ENST00000609107 YEATS4O95619 227 aa16.4■□□□□ 0.22
LINC02538-201ENST00000609107 ELP1O95163 1332 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 A0A1B0GVL5 298 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 PDE8AO60658 829 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
LINC02538-201ENST00000609107 CBX8Q9HC52 389 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 E7EWF7 191 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 LMOD1P29536 600 aaPredicted RBP16.39■□□□□ 0.21
LINC02538-201ENST00000609107 UBA7P41226 1012 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 CPLX3Q8WVH0 158 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 TCP11L1Q9NUJ3 509 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 IQSEC3Q9UPP2 1182 aaPredicted RBP16.39■□□□□ 0.21
LINC02538-201ENST00000609107 TCIRG1Q13488 830 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 LEKR1Q6ZMV7 388 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 PI4K2BQ8TCG2 481 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 NUP88Q99567 741 aaPredicted RBP16.39■□□□□ 0.21
LINC02538-201ENST00000609107 RMND1Q9NWS8 449 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 DEPDC5O75140 1603 aa16.39■□□□□ 0.21
LINC02538-201ENST00000609107 PIK3C2BO00750 1634 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 ANO1Q5XXA6 986 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 MBD4O95243 580 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 FGFR1OPO95684 399 aaKnown RBP16.38■□□□□ 0.21
LINC02538-201ENST00000609107 TMEM266Q2M3C6 531 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 SH3TC1Q8TE82 1336 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 GNAQP50148 359 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 GSTO1P78417 241 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 NBPF5PQ86XG9 351 aaPredicted RBP16.38■□□□□ 0.21
LINC02538-201ENST00000609107 RPGRQ92834 1020 aaKnown RBP16.38■□□□□ 0.21
LINC02538-201ENST00000609107 ZNF274Q96GC6 653 aaPredicted RBP16.38■□□□□ 0.21
LINC02538-201ENST00000609107 CTAGE1Q96RT6 745 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 SETQ01105 290 aaPredicted RBP16.38■□□□□ 0.21
LINC02538-201ENST00000609107 ADCK5Q3MIX3 580 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 PARP10Q53GL7 1025 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 ADGRL3Q9HAR2 1447 aa16.38■□□□□ 0.21
LINC02538-201ENST00000609107 TAF5LO75529 589 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 SPAG1Q07617 926 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 KRI1Q8N9T8 703 aaKnown RBP16.37■□□□□ 0.21
LINC02538-201ENST00000609107 NCAPD2Q15021 1401 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 ZNF500O60304 480 aaPredicted RBP16.37■□□□□ 0.21
LINC02538-201ENST00000609107 PFKFB2O60825 505 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 ZNF75DP51815 510 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 FBXO3Q9UK99 471 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 CDC42BPGQ6DT37 1551 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 AMPD3Q01432 767 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 SPA17Q15506 151 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 DNAJC10Q8IXB1 793 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 IFNKQ9P0W0 207 aa16.37■□□□□ 0.21
LINC02538-201ENST00000609107 B4E1Z4 1266 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 CHAMP1Q96JM3 812 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 DTNBO60941 627 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 RXRAP19793 462 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 GNG11P61952 73 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 ZSCAN29Q8IWY8 852 aaPredicted RBP16.36■□□□□ 0.21
LINC02538-201ENST00000609107 ACSBG1Q96GR2 724 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
LINC02538-201ENST00000609107 ZAP70P43403 619 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 MTX1Q13505 466 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 TSG101Q99816 390 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 RBM5P52756 815 aaKnown RBP eCLIP16.36■□□□□ 0.21
LINC02538-201ENST00000609107 MIGA1Q8NAN2 632 aa16.36■□□□□ 0.21
LINC02538-201ENST00000609107 LPIN2Q92539 896 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms