RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 ACAD11Q709F0 780 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 TMEM102Q8N9M5 508 aaPredicted RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 KLHL23Q8NBE8 558 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 TMC1Q8TDI8 760 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 ASAP3Q8TDY4 903 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 SLC7A3Q8WY07 619 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 SSBP4Q9BWG4 385 aaPredicted RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 KRTAP4-6Q9BYQ5 205 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 SEC31BQ9NQW1 1179 aa8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 POLA1P09884 1462 aaPredicted RBP8.74□□□□□ -1.01
CSNK1A1-211ENST00000606826 GLB1P16278 677 aa8.73□□□□□ -1.01
CSNK1A1-211ENST00000606826 ARHGAP4P98171 946 aa8.73□□□□□ -1.01
CSNK1A1-211ENST00000606826 TMEM130Q8N3G9 435 aa8.73□□□□□ -1.01
CSNK1A1-211ENST00000606826 ZFYVE28Q9HCC9 887 aa8.73□□□□□ -1.01
CSNK1A1-211ENST00000606826 TARBP1Q13395 1621 aaKnown RBP8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 WISP1O95388 367 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 ITGB7P26010 798 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 PIP4K2BP78356 416 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 DUOXA2Q1HG44 320 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 NXPE3Q969Y0 559 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 LATS2Q9NRM7 1088 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 KCNK4Q9NYG8 393 aa8.72□□□□□ -1.01
CSNK1A1-211ENST00000606826 FGD5Q6ZNL6 1462 aa8.71□□□□□ -1.01
CSNK1A1-211ENST00000606826 NEFLP07196 543 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 ARL4DP49703 201 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 PDE3BQ13370 1112 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 ECM1Q16610 540 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 PRSS36Q5K4E3 855 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 BSNDQ8WZ55 320 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 KLHDC7BQ96G42 594 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 SOX13Q9UN79 622 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 SOGA1O94964 1423 aa8.71□□□□□ -1.02
CSNK1A1-211ENST00000606826 DDX3YO15523 660 aaKnown RBP8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 NLRP12P59046 1061 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 IKBKEQ14164 716 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 ZMYM1Q5SVZ6 1142 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 UBASH3BQ8TF42 649 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 WNT8BQ93098 351 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 BIN2Q9UBW5 565 aaPredicted RBP8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 CUX1P39880 1505 aa8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 ZNF608Q9ULD9 1512 aaPredicted RBP8.7□□□□□ -1.02
CSNK1A1-211ENST00000606826 PEAR1Q5VY43 1037 aaPredicted RBP8.69□□□□□ -1.02
CSNK1A1-211ENST00000606826 OSGEPQ9NPF4 335 aa8.69□□□□□ -1.02
CSNK1A1-211ENST00000606826 ADAM11O75078 769 aa8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 BRD1O95696 1058 aa8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 C19orf57Q0VDD7 668 aa8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 DZIP1LQ8IYY4 767 aaKnown RBP8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 BHLHE41Q9C0J9 482 aaPredicted RBP8.68□□□□□ -1.02
CSNK1A1-211ENST00000606826 METTL12A8MUP2 240 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 ORC1Q13415 861 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 WRNQ14191 1432 aaPredicted RBP eCLIP8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 USPL1Q5W0Q7 1092 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 GALNT12Q8IXK2 581 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 MAGI1Q96QZ7 1491 aaPredicted RBP8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 CITED4Q96RK1 184 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 FAM129BQ96TA1 746 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 CEP41Q9BYV8 373 aa8.67□□□□□ -1.02
CSNK1A1-211ENST00000606826 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 BIVM-ERCC5R4GMW8 1640 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 SCO2A0A1W2PP80 73 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 SOWAHDA6NJG2 315 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 TM4SF5O14894 197 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 CPNE3O75131 537 aaKnown RBP8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 HGSNATQ68CP4 663 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 PRR23CQ6ZRP0 262 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 Q6ZS46 218 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 VN1R5Q7Z5H4 357 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 LIN7BQ9HAP6 207 aa8.66□□□□□ -1.02
CSNK1A1-211ENST00000606826 AQRO60306 1485 aaKnown RBP eCLIP8.65□□□□□ -1.028e-10■■■■□ 24.1
CSNK1A1-211ENST00000606826 GRIN2BQ13224 1484 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 RAD54L2Q9Y4B4 1467 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 A0A1W2PP55 124 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 GPR182O15218 404 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 KIAA1211Q6ZU35 1233 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 NIF3L1Q9GZT8 377 aa8.65□□□□□ -1.02
CSNK1A1-211ENST00000606826 ABCA10Q8WWZ4 1543 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 CHD1O14646 1710 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 SOX1O00570 391 aaPredicted RBP8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 UTP4Q969X6 686 aaKnown RBP8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 UBL7Q96S82 380 aaPredicted RBP8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 RUSC1Q9BVN2 902 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 USP26Q9BXU7 913 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 NPHS2Q9NP85 383 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 PBRM1Q86U86 1689 aa8.64□□□□□ -1.03
CSNK1A1-211ENST00000606826 SART1O43290 800 aaKnown RBP8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 Q8N3U1 123 aa8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 RNF208Q9H0X6 261 aa8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 EHD4Q9H223 541 aa8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 GNEQ9Y223 722 aaKnown RBP8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 GAPVD1Q14C86 1478 aa8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 SNAPC4Q5SXM2 1469 aa8.63□□□□□ -1.03
CSNK1A1-211ENST00000606826 TDRD9Q8NDG6 1382 aaKnown RBP8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 SYNJ1O43426 1573 aa8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 A0A096LPE4 126 aa8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 A0A1W2PPZ6 126 aa8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 EIF1AYO14602 144 aaKnown RBP8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 ESRRAP11474 423 aaPredicted RBP8.62□□□□□ -1.03
CSNK1A1-211ENST00000606826 GSTM4Q03013 218 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms