RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 AMER1Q5JTC6 1135 aaPredicted RBP7.03□□□□□ -1.28
ERCC1-216ENST00000592444 SPRYD7Q5W111 196 aa7.03□□□□□ -1.28
ERCC1-216ENST00000592444 PACS2Q86VP3 889 aa7.03□□□□□ -1.28
ERCC1-216ENST00000592444 NBPF5PQ86XG9 351 aaPredicted RBP7.03□□□□□ -1.28
ERCC1-216ENST00000592444 TMC1Q8TDI8 760 aa7.03□□□□□ -1.28
ERCC1-216ENST00000592444 ATXN2LQ8WWM7 1075 aaKnown RBP7.03□□□□□ -1.28
ERCC1-216ENST00000592444 NECAB3Q96P71 396 aaPredicted RBP7.03□□□□□ -1.28
ERCC1-216ENST00000592444 ZNF646O15015 1829 aaPredicted RBP7.03□□□□□ -1.28
ERCC1-216ENST00000592444 ALPK3Q96L96 1907 aa7.03□□□□□ -1.28
ERCC1-216ENST00000592444 ZDBF2Q9HCK1 2354 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 MANSC4A6NHS7 340 aaPredicted RBP7.02□□□□□ -1.29
ERCC1-216ENST00000592444 CCL5P13501 91 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 EIF5P55010 431 aaKnown RBP7.02□□□□□ -1.29
ERCC1-216ENST00000592444 GRIPAP1Q4V328 841 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 U2AF1L4Q8WU68 220 aaKnown RBP7.02□□□□□ -1.29
ERCC1-216ENST00000592444 DPF2Q92785 391 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 RNF208Q9H0X6 261 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 C5orf42Q9H799 3197 aa7.02□□□□□ -1.29
ERCC1-216ENST00000592444 RAB3GAP2Q9H2M9 1393 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 FAM86C2PA6NEL3 165 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 HSP90AB1P08238 724 aaKnown RBP7.01□□□□□ -1.29
ERCC1-216ENST00000592444 PPP4CP60510 307 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 PTPN12Q05209 780 aaKnown RBP7.01□□□□□ -1.29
ERCC1-216ENST00000592444 KCTD2Q14681 263 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 MAP3K11Q16584 847 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 KIF4BQ2VIQ3 1234 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 PRAMEF18Q5VWM3 479 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 IL27Q8NEV9 243 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 SLC12A5Q9H2X9 1139 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 TTYH1Q9H313 450 aaPredicted RBP7.01□□□□□ -1.29
ERCC1-216ENST00000592444 C11orf16Q9NQ32 467 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 WDR70Q9NW82 654 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 SCAF8Q9UPN6 1271 aaKnown RBP7.01□□□□□ -1.29
ERCC1-216ENST00000592444 ZNF330Q9Y3S2 320 aaPredicted RBP7.01□□□□□ -1.29
ERCC1-216ENST00000592444 NCAPD2Q15021 1401 aa7.01□□□□□ -1.29
ERCC1-216ENST00000592444 COL2A1P02458 1487 aaPredicted RBP7□□□□□ -1.29
ERCC1-216ENST00000592444 YDJCA8MPS7 323 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 NRG2O14511 850 aaPredicted RBP7□□□□□ -1.29
ERCC1-216ENST00000592444 GPR37L1O60883 481 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 PRSS12P56730 875 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 MRPS5P82675 430 aaKnown RBP7□□□□□ -1.29
ERCC1-216ENST00000592444 ANGEL2Q5VTE6 544 aaKnown RBP7□□□□□ -1.29
ERCC1-216ENST00000592444 CDCA7LQ96GN5 454 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 PAWRQ96IZ0 340 aaKnown RBP7□□□□□ -1.29
ERCC1-216ENST00000592444 PRKD2Q9BZL6 878 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 VPS33BQ9H267 617 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 SCN7AQ01118 1682 aa7□□□□□ -1.29
ERCC1-216ENST00000592444 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 GRXCR2A6NFK2 248 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 SMIM22K7EJ46 135 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 SGPL1O95470 568 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 PPM1EQ8WY54 764 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 ARHGAP39Q9C0H5 1083 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 THEGQ9P2T0 379 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 XIRP2A4UGR9 3374 aa6.99□□□□□ -1.29
ERCC1-216ENST00000592444 FLT4P35916 1363 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 KIF24Q5T7B8 1368 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 FAM177BA6PVY3 158 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 PSMD14O00487 310 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 CAMTA2O94983 1202 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 TFRCP02786 760 aaKnown RBP6.98□□□□□ -1.29
ERCC1-216ENST00000592444 MDM2Q00987 491 aaPredicted RBP6.98□□□□□ -1.29
ERCC1-216ENST00000592444 PRKG1Q13976 671 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 SCARF1Q14162 830 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 OTUD7BQ6GQQ9 843 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 EYA1Q99502 592 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 BIN2Q9UBW5 565 aaPredicted RBP6.98□□□□□ -1.29
ERCC1-216ENST00000592444 FAM198AQ9UFP1 575 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 TCF20Q9UGU0 1960 aaKnown RBP6.98□□□□□ -1.29
ERCC1-216ENST00000592444 SPTBN4Q9H254 2564 aa6.98□□□□□ -1.29
ERCC1-216ENST00000592444 KMT2BQ9UMN6 2715 aaPredicted RBP6.98□□□□□ -1.29
ERCC1-216ENST00000592444 ST20-MTHFSA0A0A6YYL1 179 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 SSC5DA1L4H1 1573 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 SMAPO00193 183 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 GRK4P32298 578 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 MTHFSP49914 203 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 SLC39A6Q13433 755 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 COL9A2Q14055 689 aaPredicted RBP6.97□□□□□ -1.29
ERCC1-216ENST00000592444 TPTE2Q6XPS3 522 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 NECAB2Q7Z6G3 386 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
ERCC1-216ENST00000592444 PTPN18Q99952 460 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 TERF2IPQ9NYB0 399 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 ZSWIM8A7E2V4 1837 aa6.97□□□□□ -1.29
ERCC1-216ENST00000592444 ATRXP46100 2492 aa6.96□□□□□ -1.29
ERCC1-216ENST00000592444 EPG5Q9HCE0 2579 aa6.96□□□□□ -1.29
ERCC1-216ENST00000592444 RIC1Q4ADV7 1423 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 OSBPP22059 807 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 KIAA2012Q0VF49 1180 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 CRY2Q49AN0 593 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 ZNF530Q6P9A1 599 aaPredicted RBP6.96□□□□□ -1.3
ERCC1-216ENST00000592444 SUPT20HQ8NEM7 779 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 SLC10A4Q96EP9 437 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 UNC93B1Q9H1C4 597 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 RTN4Q9NQC3 1192 aaKnown RBP6.96□□□□□ -1.3
ERCC1-216ENST00000592444 IGSF5Q9NSI5 407 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 RIPOR2Q9Y4F9 1068 aa6.96□□□□□ -1.3
ERCC1-216ENST00000592444 V9GY48 417 aaPredicted RBP6.96□□□□□ -1.3
ERCC1-216ENST00000592444 NBPF26B4DH59 902 aa6.95□□□□□ -1.3
ERCC1-216ENST00000592444 C3orf80F5H4A9 247 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms