RNA–Protein interactions for RNA: ENST00000589285.1

ZNF540-207, Transcript of zinc finger protein 540, humanhuman

Gene ZNF540, Length 3,106 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-207ENST00000589285 KLHDC7BQ96G42 594 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 ASB16Q96NS5 453 aa5.06□□□□□ -1.6
ZNF540-207ENST00000589285 DUSP9Q99956 384 aaKnown RBP5.06□□□□□ -1.6
ZNF540-207ENST00000589285 SYNJ2O15056 1496 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 GLI2P10070 1586 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 NUP160Q12769 1436 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 GRM2Q14416 872 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 ADAM11O75078 769 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 CPNE3O75131 537 aaKnown RBP5.05□□□□□ -1.6
ZNF540-207ENST00000589285 FCGRTP55899 365 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 HYAL2Q12891 473 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 GIPC2Q8TF65 315 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 TCF12Q99081 682 aa5.05□□□□□ -1.6
ZNF540-207ENST00000589285 LDHBP07195 334 aaKnown RBP5.04□□□□□ -1.6
ZNF540-207ENST00000589285 USP5P45974 858 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 SETDB1Q15047 1291 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 VN1R5Q7Z5H4 357 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 CSRNP1Q96S65 589 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 TRIM56Q9BRZ2 755 aaKnown RBP5.04□□□□□ -1.6
ZNF540-207ENST00000589285 GRIN2BQ13224 1484 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 ARAP1Q96P48 1450 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 PDE2AO00408 941 aaPredicted RBP5.04□□□□□ -1.6
ZNF540-207ENST00000589285 KIF4AO95239 1232 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 SELPP16109 830 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 SOX18P35713 384 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 FAAP100Q0VG06 881 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 FAM13BQ9NYF5 915 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 TOP2BQ02880 1626 aa5.04□□□□□ -1.6
ZNF540-207ENST00000589285 CTSBP07858 339 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 PLCB3Q01970 1234 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 FOXD4L6Q3SYB3 417 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-207ENST00000589285 MSL1Q68DK7 614 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 FOXD4L3Q6VB84 417 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-207ENST00000589285 NXPE3Q969Y0 559 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 BCO2Q9BYV7 579 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 ABCB6Q9NP58 842 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 A0A0A0MRY4 1105 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 ZNF423Q2M1K9 1284 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 XKR5Q6UX68 686 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 GLIS3Q8NEA6 775 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 EHD4Q9H223 541 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 AVENQ9NQS1 362 aaPredicted RBP5.03□□□□□ -1.6
ZNF540-207ENST00000589285 AKAP2Q9Y2D5 859 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 KIF27Q86VH2 1401 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 PAGE1O75459 146 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 PDE4CQ08493 712 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 PDE3BQ13370 1112 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 CYB5RLQ6IPT4 315 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 UBASH3BQ8TF42 649 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 DCAF5Q96JK2 942 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 RAPGEF2Q9Y4G8 1499 aa5.03□□□□□ -1.6
ZNF540-207ENST00000589285 CUL7Q14999 1698 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 FMR1Q06787 632 aaKnown RBP eCLIP5.02□□□□□ -1.61
ZNF540-207ENST00000589285 TPTE2Q6XPS3 522 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 STK35Q8TDR2 534 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 ENAMQ9NRM1 1142 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 MKL2Q9ULH7 1088 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 SOX1O00570 391 aaPredicted RBP5.02□□□□□ -1.61
ZNF540-207ENST00000589285 DRD2P14416 443 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 NRG1Q02297 640 aaPredicted RBP5.02□□□□□ -1.61
ZNF540-207ENST00000589285 RASSF7Q02833 373 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 ENOX2Q16206 610 aaKnown RBP5.02□□□□□ -1.61
ZNF540-207ENST00000589285 RASIP1Q5U651 963 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 CD163Q86VB7 1156 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 WFDC8Q8IUA0 241 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 LIN7BQ9HAP6 207 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 CARMIL1Q5VZK9 1371 aa5.02□□□□□ -1.61
ZNF540-207ENST00000589285 BEND7Q8N7W2 519 aaPredicted RBP5.01□□□□□ -1.61
ZNF540-207ENST00000589285 MAP3K11Q16584 847 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 GPAT2Q6NUI2 795 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 CCNJLQ8IV13 435 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 PCGF6Q9BYE7 350 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 NLRP2Q9NX02 1062 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 PARP2Q9UGN5 583 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 C1QTNF9BB2RNN3 333 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 GNB5O14775 395 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 TM4SF5O14894 197 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 SMNDC1O75940 238 aaKnown RBP eCLIP5.01□□□□□ -1.61
ZNF540-207ENST00000589285 EDN3P14138 238 aa5.01□□□□□ -1.61
ZNF540-207ENST00000589285 ZSCAN29Q8IWY8 852 aaPredicted RBP5.01□□□□□ -1.61
ZNF540-207ENST00000589285 KIF13AQ9H1H9 1805 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 A0A096LPE4 126 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 A0A1W2PPZ6 126 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 ITGAEP38570 1179 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 PODNQ7Z5L7 613 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 FMR1NBQ8N0W7 255 aaPredicted RBP5□□□□□ -1.61
ZNF540-207ENST00000589285 WDR89Q96FK6 387 aaPredicted RBP5□□□□□ -1.61
ZNF540-207ENST00000589285 BCL2L13Q9BXK5 485 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 USP26Q9BXU7 913 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 USP21Q9UK80 565 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 PPME1Q9Y570 386 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 FBXO33Q7Z6M2 555 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 GALNT12Q8IXK2 581 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 GAPVD1Q14C86 1478 aa5□□□□□ -1.61
ZNF540-207ENST00000589285 UHRF1BP1LA0JNW5 1464 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 UNCXA6NJT0 531 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 FSCN2O14926 492 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 GDF11O95390 407 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 CELA3AP09093 270 aa4.99□□□□□ -1.61
ZNF540-207ENST00000589285 CTSHP09668 335 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms