RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 ECE2O60344 883 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 GSPT1P15170 499 aaKnown RBP16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 YBX3P16989 372 aaKnown RBP eCLIP16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 LMNB1P20700 586 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 GPR162Q16538 588 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 ARHGAP27Q6ZUM4 889 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 PELP1Q8IZL8 1130 aaKnown RBP16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 GPR101Q96P66 508 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZNF277Q9NRM2 450 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZNRF3Q9ULT6 936 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 SUGT1Q9Y2Z0 365 aa16.18■□□□□ 0.18
LDLRAD4-210ENST00000587600 TRIM6-TRIM34B2RNG4 842 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 HIP1O00291 1037 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 SCARF1Q14162 830 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 STRIP1Q5VSL9 837 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 SPTY2D1Q68D10 685 aaPredicted RBP16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZSCAN25Q6NSZ9 544 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 KBTBD3Q8NAB2 608 aa16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 DNAJC2Q99543 621 aaKnown RBP16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.17■□□□□ 0.18
LDLRAD4-210ENST00000587600 EIF5BO60841 1220 aaKnown RBP16.16■□□□□ 0.18
LDLRAD4-210ENST00000587600 SDSP20132 328 aa16.16■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZAP70P43403 619 aa16.16■□□□□ 0.18
LDLRAD4-210ENST00000587600 SKAP1Q86WV1 359 aa16.16■□□□□ 0.18
LDLRAD4-210ENST00000587600 MYO3BQ8WXR4 1341 aa16.16■□□□□ 0.18
LDLRAD4-210ENST00000587600 GOLIM4O00461 696 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 CYP2E1P05181 493 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZFYP08048 801 aaPredicted RBP16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 MMP14P50281 582 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 MAP3K12Q12852 859 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 DOK7Q18PE1 504 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 CASC1Q6TDU7 716 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 DBNDD1Q9H9R9 158 aa16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 ZC3H4Q9UPT8 1303 aaKnown RBP16.15■□□□□ 0.18
LDLRAD4-210ENST00000587600 USP17L3A6NCW0 530 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 USP17L4A6NCW7 530 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 TTLL5Q6EMB2 1281 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 USP17L1Q7RTZ2 530 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 RILPL2Q969X0 211 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 FSD1Q9BTV5 496 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 SNRKQ9NRH2 765 aa16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 IQSEC3Q9UPP2 1182 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 COL1A1P02452 1464 aaPredicted RBP16.14■□□□□ 0.17
LDLRAD4-210ENST00000587600 GTF2IP78347 998 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 RASSF7Q02833 373 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 TNIP1Q15025 636 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 PI16Q6UXB8 463 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 LRP2BPQ9P2M1 347 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 MAST3O60307 1309 aa16.13■□□□□ 0.17
LDLRAD4-210ENST00000587600 FZD9O00144 591 aa16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 CDC45O75419 566 aa16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 EIF6P56537 245 aaKnown RBP16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 MFSD14BQ5SR56 506 aa16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 ERICH6Q7L0X2 663 aa16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 SLF2Q8IX21 1173 aa16.12■□□□□ 0.17
LDLRAD4-210ENST00000587600 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 VIL1P09327 827 aaKnown RBP16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 GSTO1P78417 241 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 DACT2Q5SW24 774 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 CERS3Q8IU89 383 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 ANTXR1Q9H6X2 564 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 ABCF2Q9UG63 623 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 AKAP11Q9UKA4 1901 aa16.11■□□□□ 0.17
LDLRAD4-210ENST00000587600 IDH1O75874 414 aaKnown RBP16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 RPS12P25398 132 aaKnown RBP16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 CIAPIN1Q6FI81 312 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 AGBL3Q8NEM8 1001 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 MRIQ9BWK5 157 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 PIH1D3Q9NQM4 214 aaKnown RBP16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 DIAPH3Q9NSV4 1193 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 RAI14Q9P0K7 980 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 NDUFB9Q9Y6M9 179 aa16.1■□□□□ 0.17
LDLRAD4-210ENST00000587600 COL4A5P29400 1685 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 RNF113AO15541 343 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 LDHCP07864 332 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 PRELPP51888 382 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 HDLBPQ00341 1268 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 CXCL9Q07325 125 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 SLC9C2Q5TAH2 1124 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 RSBN1LQ6PCB5 846 aaPredicted RBP16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 DZIP1Q86YF9 867 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 EDC3Q96F86 508 aaKnown RBP16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 RAD50Q92878 1312 aa16.09■□□□□ 0.17
LDLRAD4-210ENST00000587600 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 ADD2P35612 726 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 TBC1D9Q6ZT07 1266 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 FBXW7Q969H0 707 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 NSUN4Q96CB9 384 aaKnown RBP16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 HELLSQ9NRZ9 838 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 RNF181Q9P0P0 153 aa16.08■□□□□ 0.16
LDLRAD4-210ENST00000587600 PSMD14O00487 310 aa16.07■□□□□ 0.16
LDLRAD4-210ENST00000587600 PDE6AP16499 860 aa16.07■□□□□ 0.16
LDLRAD4-210ENST00000587600 CHMLP26374 656 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms