RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 IMMTQ16891 758 aaKnown RBP13.36□□□□□ -0.27
LIG3-204ENST00000585740 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
LIG3-204ENST00000585740 ANKRD18AQ8IVF6 992 aa13.36□□□□□ -0.27
LIG3-204ENST00000585740 STK32BQ9NY57 414 aa13.36□□□□□ -0.27
LIG3-204ENST00000585740 TPCN1Q9ULQ1 816 aa13.36□□□□□ -0.27
LIG3-204ENST00000585740 MYO5AQ9Y4I1 1855 aaKnown RBP13.36□□□□□ -0.27
LIG3-204ENST00000585740 TCHHQ07283 1943 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 LARGE1O95461 756 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 NCLP19338 710 aaKnown RBP13.35□□□□□ -0.27
LIG3-204ENST00000585740 SYT1P21579 422 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 GTF2E1P29083 439 aaPredicted RBP13.35□□□□□ -0.27
LIG3-204ENST00000585740 PHKA1P46020 1223 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 SLC15A2Q16348 729 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 MTFR1LQ9H019 292 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 GZF1Q9H116 711 aaPredicted RBP13.35□□□□□ -0.27
LIG3-204ENST00000585740 SEC31BQ9NQW1 1179 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 C4BP0C0L5 1744 aa13.35□□□□□ -0.27
LIG3-204ENST00000585740 GNPATO15228 680 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 PRPF40AO75400 957 aaKnown RBP13.34□□□□□ -0.27
LIG3-204ENST00000585740 CHGBP05060 677 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 MRE11P49959 708 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 FGD1P98174 961 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 MAP3K12Q12852 859 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 UBE4AQ14139 1066 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 TXNRD1Q16881 649 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 ERFEQ4G0M1 354 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 Q6ZUG5 572 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 FBXL16Q8N461 479 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 SGIP1Q9BQI5 828 aa13.34□□□□□ -0.27
LIG3-204ENST00000585740 LLPHQ9BRT6 129 aaKnown RBP13.34□□□□□ -0.27
LIG3-204ENST00000585740 GNL3LQ9NVN8 582 aaKnown RBP13.34□□□□□ -0.27
LIG3-204ENST00000585740 BSDC1Q9NW68 430 aaPredicted RBP13.34□□□□□ -0.27
LIG3-204ENST00000585740 E7EWF7 191 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 GPAA1O43292 621 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 F13A1P00488 732 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 EXOSC10Q01780 885 aaKnown RBP13.33□□□□□ -0.28
LIG3-204ENST00000585740 CHRNDQ07001 517 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 SLC9C2Q5TAH2 1124 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 SPATA5Q8NB90 893 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 TMEM87AQ8NBN3 555 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 GTF3C6Q969F1 213 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 NLRP3Q96P20 1036 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 LARP6Q9BRS8 491 aaKnown RBP13.33□□□□□ -0.28
LIG3-204ENST00000585740 AGXT2Q9BYV1 514 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 TAF6LQ9Y6J9 622 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 ZMYM6O95789 1325 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 WDR19Q8NEZ3 1342 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 C4AP0C0L4 1744 aa13.33□□□□□ -0.28
LIG3-204ENST00000585740 CEP350Q5VT06 3117 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 PFKFB2O60825 505 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 IDH1O75874 414 aaKnown RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 PDE6AP16499 860 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 ST3GAL1Q11201 340 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 ALX1Q15699 326 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 GPR162Q16538 588 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 FOXD4L5Q5VV16 416 aaPredicted RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 TPTE2Q6XPS3 522 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 STOX1Q6ZVD7 989 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 NBPF5PQ86XG9 351 aaPredicted RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 NECAB1Q8N987 351 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 HELBQ8NG08 1087 aaPredicted RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 FOXD4L4Q8WXT5 416 aaPredicted RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 SYAP1Q96A49 352 aaPredicted RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 BCL2L12Q9HB09 334 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 PIH1D3Q9NQM4 214 aaKnown RBP13.32□□□□□ -0.28
LIG3-204ENST00000585740 CHD4Q14839 1912 aa13.32□□□□□ -0.28
LIG3-204ENST00000585740 ZNF213O14771 459 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 GNAT2P19087 354 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 ZNF445P59923 1031 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 HMGN5P82970 282 aaKnown RBP13.31□□□□□ -0.28
LIG3-204ENST00000585740 SLFNL1Q499Z3 407 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 TRAPPC3LQ5T215 181 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 LARP1BQ659C4 914 aaKnown RBP13.31□□□□□ -0.28
LIG3-204ENST00000585740 PI16Q6UXB8 463 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 ZNF274Q96GC6 653 aaPredicted RBP13.31□□□□□ -0.28
LIG3-204ENST00000585740 TCEANC2Q96MN5 208 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 ANKRD2Q9GZV1 360 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 PUS7LQ9H0K6 701 aaKnown RBP13.31□□□□□ -0.28
LIG3-204ENST00000585740 MTMR6Q9Y217 621 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 ZNF532Q9HCE3 1301 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 MYH13Q9UKX3 1938 aa13.31□□□□□ -0.28
LIG3-204ENST00000585740 TCRBV5S4A2TA0A5A2 114 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 SEMA3EO15041 775 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 ZBTB22O15209 634 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 FGAP02671 866 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 RASGRF1Q13972 1273 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
LIG3-204ENST00000585740 KLHL34Q8N239 644 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 NCOA7Q8NI08 942 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 BRF1Q92994 677 aa13.3□□□□□ -0.28
LIG3-204ENST00000585740 IGSF3O75054 1194 aa13.29□□□□□ -0.28
LIG3-204ENST00000585740 MCM5P33992 734 aa13.29□□□□□ -0.28
LIG3-204ENST00000585740 RFC4P35249 363 aa13.29□□□□□ -0.28
LIG3-204ENST00000585740 TRDNQ13061 729 aa13.29□□□□□ -0.28
LIG3-204ENST00000585740 CAVIN4Q5BKX8 364 aa13.29□□□□□ -0.28
LIG3-204ENST00000585740 SLC27A3Q5K4L6 730 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms