RNA–Protein interactions for RNA: ENST00000585315.5

CDH8-214, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 9,076 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-214ENST00000585315 MLKLQ8NB16 471 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 NUP58Q9BVL2 599 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 IFNKQ9P0W0 207 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 SEPT6Q14141 434 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 RUFY3Q7L099 469 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 CCDC97Q96F63 343 aaPredicted RBP8.27□□□□□ -1.09
CDH8-214ENST00000585315 TSKSQ9UJT2 592 aa8.27□□□□□ -1.09
CDH8-214ENST00000585315 HOXB7P09629 217 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 PLCD1P51178 756 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 TMTC1Q8IUR5 882 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 DRC1Q96MC2 740 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDH8-214ENST00000585315 HAND2P61296 217 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 SPATS2Q86XZ4 545 aaKnown RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 PLEKHM2Q8IWE5 1019 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 NECAB1Q8N987 351 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 TRIM7Q9C029 511 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 NDUFAB1O14561 156 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 AK2P54819 239 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 MXRA7P84157 204 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 MRPL50Q8N5N7 158 aaKnown RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 USP26Q9BXU7 913 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 ATP6V0A2Q9Y487 856 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 UHRF1BP1Q6BDS2 1440 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 B4DLN1 442 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 AFMP43652 599 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 MRPL12P52815 198 aaKnown RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 CHMP4BP1P59074 171 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 IDI1Q13907 227 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 CCDC122Q5T0U0 273 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 CERS3Q8IU89 383 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 MMRN2Q9H8L6 949 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 GUCA1BQ9UMX6 200 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 ANAPC4Q9UJX5 808 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 DCAF8L1A6NGE4 600 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 CHMLP26374 656 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 UBXN1Q04323 297 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 WDR78Q5VTH9 848 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 WAPLQ7Z5K2 1190 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 NUCKS1Q9H1E3 243 aaKnown RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.26□□□□□ -1.09
CDH8-214ENST00000585315 SSX2IPQ9Y2D8 614 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 COMMD10Q9Y6G5 202 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 ZEB2O60315 1214 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 DTHD1Q6ZMT9 781 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 SYNCQ9H7C4 482 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 SPINK5Q9NQ38 1064 aaPredicted RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 PAG1Q9NWQ8 432 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 FEZ2Q9UHY8 353 aaPredicted RBP8.26□□□□□ -1.09
CDH8-214ENST00000585315 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
CDH8-214ENST00000585315 NESP48681 1621 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 CREB3L3Q68CJ9 461 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 CACNA2D3Q8IZS8 1091 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 AFAP1L1Q8TED9 768 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 NAPGQ99747 312 aaPredicted RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 RBM28Q9NW13 759 aaKnown RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 NOS1P29475 1434 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 ZNF569Q5MCW4 686 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 CEP85Q6P2H3 762 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 ARHGAP24Q8N264 748 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 ZNF830Q96NB3 372 aaPredicted RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 LAMC3Q9Y6N6 1575 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 IFT20Q8IY31 132 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 RNF216Q9NWF9 866 aaPredicted RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 CPSF2Q9P2I0 782 aaKnown RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 TXNDC16Q9P2K2 825 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 RAB3IL1Q8TBN0 382 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 SYT10Q6XYQ8 523 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 TMEM87BQ96K49 555 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 TSPY3P0CV98 308 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 TSPY8P0CW00 308 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 SKAP1Q86WV1 359 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 UTP14AQ9BVJ6 771 aaKnown RBP8.25□□□□□ -1.09
CDH8-214ENST00000585315 PTPDC1A2A3K4 754 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 LZTFL1Q9NQ48 299 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 STK24Q9Y6E0 443 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 FLT4P35916 1363 aa8.25□□□□□ -1.09
CDH8-214ENST00000585315 NOL3O60936 208 aaKnown RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 VAMP4O75379 141 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 MARCKSP29966 332 aaPredicted RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 ISM2Q6H9L7 571 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 STMN2Q93045 179 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 SAMM50Q9Y512 469 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 SLC9C2Q5TAH2 1124 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 LMNTD2Q8IXW0 634 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 TM6SF1Q9BZW5 370 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 KRT2P35908 639 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 KIF3CO14782 793 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 INF2Q27J81 1249 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 WDR66Q8TBY9 1149 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 CCDC51Q96ER9 411 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 DUOX2Q9NRD8 1548 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 INPP5BP32019 993 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 ATP11AP98196 1134 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 MAP7D1Q3KQU3 841 aa8.24□□□□□ -1.09
CDH8-214ENST00000585315 NAA16Q6N069 864 aaPredicted RBP8.24□□□□□ -1.09
CDH8-214ENST00000585315 VCX3BQ9H321 246 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms