RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	BIN2	Q9UBW5	565 aa	Predicted RBP	7.17	□□□□□ -1.26
MSI2-216	ENST00000582772	RTL9	Q8NET4	1388 aa		7.17	□□□□□ -1.26
MSI2-216	ENST00000582772	CANX	P27824	592 aa	Known RBP	7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	GJA5	P36382	358 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	TCF15	Q12870	199 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	ADGRE1	Q14246	886 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	PDE3A	Q14432	1141 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	NFATC2IP	Q8NCF5	419 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	RALY	Q9UKM9	306 aa	Known RBP	7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	COL4A1	P02462	1669 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	COL4A6	Q14031	1691 aa		7.16	□□□□□ -1.26
MSI2-216	ENST00000582772	INHA	P05111	366 aa		7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	ZNF496	Q96IT1	587 aa	Predicted RBP	7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	MFSD14A	Q96MC6	490 aa		7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	TBC1D2B	Q9UPU7	963 aa		7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	ABCC12	Q96J65	1359 aa		7.15	□□□□□ -1.26
MSI2-216	ENST00000582772	PLXNA1	Q9UIW2	1896 aa		7.15	□□□□□ -1.27
MSI2-216	ENST00000582772	ZZEF1	O43149	2961 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	SOBP	A7XYQ1	873 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	VIL1	P09327	827 aa	Known RBP	7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	PSMC4	P43686	418 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	ANKRD36C	Q5JPF3	1778 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	PRAMEF18	Q5VWM3	479 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	ECM29	Q5VYK3	1845 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	HFE2	Q6ZVN8	426 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	DGLUCY	Q7Z3D6	616 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	BRI3BP	Q8WY22	251 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	ZKSCAN4	Q969J2	545 aa	Predicted RBP	7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	CLMN	Q96JQ2	1002 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	HELZ2	Q9BYK8	2649 aa	Known RBP	7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	IRF2BPL	Q9H1B7	796 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	OGDHL	Q9ULD0	1010 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	ANGEL1	Q9UNK9	670 aa	Known RBP	7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	COG5	Q9UP83	839 aa		7.14	□□□□□ -1.27
MSI2-216	ENST00000582772	FRMPD3	Q5JV73	1810 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	POTEB3	A0JP26	581 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	WDHD1	O75717	1129 aa	Predicted RBP	7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	DSG3	P32926	999 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	PRKCZ	Q05513	592 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	IRF5	Q13568	498 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	CCDC85B	Q15834	202 aa	Predicted RBP	7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	LRRC26	Q2I0M4	334 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	POTEB	Q6S5H4	581 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	C17orf99	Q6UX52	265 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	DPP8	Q6V1X1	898 aa	Predicted RBP	7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	FAM43A	Q8N2R8	423 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	HERVK_113	Q902F9	699 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	RPGR	Q92834	1020 aa	Known RBP	7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	7.13	□□□□□ -1.27	2e-6	■■□□□ 12.6
MSI2-216	ENST00000582772	BRWD1	Q9NSI6	2320 aa		7.13	□□□□□ -1.27
MSI2-216	ENST00000582772	IBTK	Q9P2D0	1353 aa	Predicted RBP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	PRR23A	A6NEV1	266 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	ADCY3	O60266	1144 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	STARD3NL	O95772	234 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	U2AF1L5	P0DN76	240 aa	Predicted RBP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	U2AF1	Q01081	240 aa	Known RBP eCLIP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	ASCL5	Q7RTU5	278 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	AGBL3	Q8NEM8	1001 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	ANKS1A	Q92625	1134 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	TIFA	Q96CG3	184 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	RBM17	Q96I25	401 aa	Known RBP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	TMX4	Q9H1E5	349 aa	Predicted RBP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	PRDM12	Q9H4Q4	367 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	ALG13	Q9NP73	1137 aa	Known RBP	7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	MYOZ2	Q9NPC6	264 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	CEP250	Q9BV73	2442 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	FRY	Q5TBA9	3013 aa		7.12	□□□□□ -1.27
MSI2-216	ENST00000582772	TECTA	O75443	2155 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	FRYL	O94915	3013 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	PRKG1	Q13976	671 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	PKN1	Q16512	942 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	NBPF10	Q6P3W6	841 aa	Known RBP	7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	EYA1	Q99502	592 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	SH2B1	Q9NRF2	756 aa	Predicted RBP	7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	TERF2IP	Q9NYB0	399 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	ZNF652	Q9Y2D9	606 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	PRRC2B	Q5JSZ5	2229 aa	Known RBP	7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	KIF20B	Q96Q89	1820 aa		7.11	□□□□□ -1.27
MSI2-216	ENST00000582772	ST20-MTHFS	A0A0A6YYL1	179 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	DCX	O43602	365 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	MTHFS	P49914	203 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	SP8	Q8IXZ3	490 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	GJD3	Q8N144	294 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	MTMR14	Q8NCE2	650 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	GML	Q99445	158 aa		7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	SCAF8	Q9UPN6	1271 aa	Known RBP	7.1	□□□□□ -1.27
MSI2-216	ENST00000582772	RLF	Q13129	1914 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	GBF1	Q92538	1859 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	CCL15-CCL14	A0A0B4J2E2	113 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	FMNL1	O95466	1100 aa	Predicted RBP	7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	GTF2A2	P52657	109 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	CCL15	Q16663	113 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	BMP8A	Q7Z5Y6	402 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	RMDN1	Q96DB5	314 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	TRPC6	Q9Y210	931 aa		7.09	□□□□□ -1.27
MSI2-216	ENST00000582772	DOCK3	Q8IZD9	2030 aa		7.09	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms