RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 MFSD6Q6ZSS7 791 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 CCDC12Q8WUD4 166 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 GJD4Q96KN9 370 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 DUOX1Q9NRD9 1551 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 XIRP1Q702N8 1843 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 BBOX1O75936 387 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 DZIP1Q86YF9 867 aaKnown RBP11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 TSPY26PQ9H489 355 aa11.85□□□□□ -0.51
TRAPPC8-211ENST00000582539 GNPATO15228 680 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 TAF5LO75529 589 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 ALDH1B1P30837 517 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 SPATA5Q8NB90 893 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 DACH1Q9UI36 760 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 KIAA2012Q0VF49 1180 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 NECTIN1Q15223 517 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 SKAP1Q86WV1 359 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 TRIM34Q9BYJ4 488 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 BRD1O95696 1058 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 MSNP26038 577 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 AK2P54819 239 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 RPS8P62241 208 aaKnown RBP11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 SLC9C2Q5TAH2 1124 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 ACSBG1Q96GR2 724 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 SUGT1Q9Y2Z0 365 aa11.84□□□□□ -0.51
TRAPPC8-211ENST00000582539 CCDC192P0DO97 292 aa11.83□□□□□ -0.51
TRAPPC8-211ENST00000582539 UBR2Q8IWV8 1755 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 MAGEB6P1A0A0J9YX57 407 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 PATL2C9JE40 543 aaKnown RBP11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 HOXA7P31268 230 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 SASS6Q6UVJ0 657 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 LZTS2Q9BRK4 669 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 COL16A1Q07092 1604 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 F13A1P00488 732 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 PDE6BP35913 854 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 FBXL16Q8N461 479 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 AK9Q5TCS8 1911 aa11.83□□□□□ -0.52
TRAPPC8-211ENST00000582539 GJB2P29033 226 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 HIBADHP31937 336 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 CATIPQ7Z7H3 387 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 SLC12A7Q9Y666 1083 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 PFKFB2O60825 505 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 CAMTA2O94983 1202 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 KCNG4Q8TDN1 519 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 UPF3BQ9BZI7 483 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 PRAMEF22A3QJZ6 481 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 NOL8Q76FK4 1167 aaKnown RBP11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 CCDC83Q8IWF9 413 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 BICD2Q8TD16 824 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 ARPP21Q9UBL0 812 aaPredicted RBP11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 XDHP47989 1333 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 PNPLA7Q6ZV29 1317 aa11.82□□□□□ -0.52
TRAPPC8-211ENST00000582539 MMP14P50281 582 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 RBM6P78332 1123 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 SOGA3Q5TF21 947 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 SPATA32Q96LK8 384 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 RIPOR2Q9Y4F9 1068 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ELP1O95163 1332 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ADD2P35612 726 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 SSRP1Q08945 709 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 HS1BP3Q53T59 392 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 KANK3Q6NY19 840 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ATG9AQ7Z3C6 839 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 TMEM87AQ8NBN3 555 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 CCDC39Q9UFE4 941 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 PARP3Q9Y6F1 533 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 MCTP2Q6DN12 878 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 CTCFLQ8NI51 663 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 C8orf76Q96K31 380 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ATP8A2Q9NTI2 1148 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ANKIB1Q9P2G1 1089 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 ZNF831Q5JPB2 1677 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 GOLGA6L19H0YKK7 550 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 MARCH10Q8NA82 808 aaPredicted RBP11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 NAP1L4Q99733 375 aaKnown RBP11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 GLT8D2Q9H1C3 349 aa11.81□□□□□ -0.52
TRAPPC8-211ENST00000582539 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 CYP7A1P22680 504 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 CCDC102BQ68D86 513 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 FAM13BQ9NYF5 915 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 AFF2P51816 1311 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 GPAA1O43292 621 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 TXLNAP40222 546 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 STK38Q15208 465 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 ZBTB43O43298 467 aa11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 ANGEL1Q9UNK9 670 aaKnown RBP11.8□□□□□ -0.52
TRAPPC8-211ENST00000582539 GTF3C6Q969F1 213 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GREM2Q9H772 168 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 TMOD2Q9NZR1 351 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GOLGA8AA7E2F4 631 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 GOLGA8BA8MQT2 603 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 PRC1O43663 620 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 CALML3P27482 149 aa11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 METAP2P50579 478 aaKnown RBP eCLIP11.79□□□□□ -0.52
TRAPPC8-211ENST00000582539 ZNF445P59923 1031 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms