RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 ZMYM6O95789 1325 aa7.5□□□□□ -1.21
PPP4R1-217ENST00000580583 RGPD3A6NKT7 1758 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 RGPD4Q7Z3J3 1758 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 E7EWF7 191 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 FOXP2O15409 715 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 ZSCAN22P10073 491 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 RFC4P35249 363 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 MAP3K12Q12852 859 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 COL9A3Q14050 684 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 IMMTQ16891 758 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 KLHL40Q2TBA0 621 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 SLC9C2Q5TAH2 1124 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 TPTE2Q6XPS3 522 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 FAM196AQ6ZSG2 479 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 KRT27Q7Z3Y8 459 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 AMIGO3Q86WK7 504 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 ARHGEF1Q92888 912 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 GTF3C6Q969F1 213 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 NLRP3Q96P20 1036 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 LARP6Q9BRS8 491 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 PUS7LQ9H0K6 701 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 QTRT2Q9H974 415 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 BSDC1Q9NW68 430 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 WWC3Q9ULE0 1092 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 ISY1Q9ULR0 285 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 ZNF532Q9HCE3 1301 aa7.49□□□□□ -1.21
PPP4R1-217ENST00000580583 TCRBV5S4A2TA0A5A2 114 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 LRRC37AA6NMS7 1700 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 NPHP1O15259 732 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 STX6O43752 255 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 MBD3O95983 291 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 F13A1P00488 732 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 PDIA4P13667 645 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 PDCP20941 246 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 GJB2P29033 226 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 FGD1P98174 961 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 UBE4AQ14139 1066 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 TRAPPC3LQ5T215 181 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 L1TD1Q5T7N2 865 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 FOXD4L5Q5VV16 416 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 Q6ZUG5 572 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 SMIM5Q71RC9 77 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 DHX32Q7L7V1 743 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 RALYLQ86SE5 291 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 NECAB1Q8N987 351 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 CNBD1Q8NA66 436 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 FOXD4L4Q8WXT5 416 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 CELF1Q92879 486 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 BRF1Q92994 677 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 ANKRD2Q9GZV1 360 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 GZF1Q9H116 711 aaPredicted RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 GNL3LQ9NVN8 582 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 ATP6V1DQ9Y5K8 247 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 DDX49Q9Y6V7 483 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 MYH13Q9UKX3 1938 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 PDS5AQ29RF7 1337 aaKnown RBP7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 WDR19Q8NEZ3 1342 aa7.48□□□□□ -1.21
PPP4R1-217ENST00000580583 TNS1Q9HBL0 1735 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 KIAA1551Q9HCM1 1747 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 VPS37CA5D8V6 355 aaPredicted RBP7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 SNAP23O00161 211 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 SEMA3EO15041 775 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 MBD4O95243 580 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 SYT1P21579 422 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 HMGB2P26583 209 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 BCAMP50895 628 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 NFIXQ14938 502 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 TTLL5Q6EMB2 1281 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 MAGEB6Q8N7X4 407 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 AIDAQ96BJ3 306 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 LRRC4BQ9NT99 713 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 LMBRD1Q9NUN5 540 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 MINPP1Q9UNW1 487 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 MTMR6Q9Y217 621 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 PNPLA7Q6ZV29 1317 aa7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 MYO5AQ9Y4I1 1855 aaKnown RBP7.47□□□□□ -1.21
PPP4R1-217ENST00000580583 A0A0G2JLW4 131 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 FSD2A1L4K1 749 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 GOLGA6L3A6NEY3 463 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 ZNF213O14771 459 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 PFKFB2O60825 505 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 GNAT2P19087 354 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 GYG1P46976 350 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 HAND2P61296 217 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 RPS8P62241 208 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 EXOSC10Q01780 885 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 STK3Q13188 491 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 CAVIN4Q5BKX8 364 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 ZNF772Q68DY9 489 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 MB21D2Q8IYB1 491 aaPredicted RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 TMEM87AQ8NBN3 555 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 NCOA7Q8NI08 942 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 CHMP4CQ96CF2 233 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 LLPHQ9BRT6 129 aaKnown RBP7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 AGXT2Q9BYV1 514 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 KIF3AQ9Y496 699 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 TAF1P21675 1872 aa7.46□□□□□ -1.22
PPP4R1-217ENST00000580583 CACNA1SQ13698 1873 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms