RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 ERBB3P21860 1342 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 PLEKHG2Q9H7P9 1386 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 ATP5J2-PTCD1G3V325 749 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 RAB11FIP3O75154 756 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 ABL1P00519 1130 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 HOXB7P09629 217 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 DNAJB2P25686 324 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 NBPF20Q3BBV1 942 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 RPAP2Q8IXW5 612 aaPredicted RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 TACO1Q9BSH4 297 aaKnown RBP8.18□□□□□ -1.1
KRT39-203ENST00000578078 TINF2Q9BSI4 451 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 CARD10Q9BWT7 1032 aa8.18□□□□□ -1.1
KRT39-203ENST00000578078 PKD1L3Q7Z443 1732 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 PARP4Q9UKK3 1724 aaKnown RBP8.17□□□□□ -1.1
KRT39-203ENST00000578078 HMMRO75330 724 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 GUCY2CP25092 1073 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 ZNF211Q13398 564 aaPredicted RBP8.17□□□□□ -1.1
KRT39-203ENST00000578078 TEX35Q5T0J7 233 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 LDLRAD1Q5T700 205 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 ANKRD45Q5TZF3 282 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 RNF135Q8IUD6 432 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 GLYCTKQ8IVS8 523 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 FAM174AQ8TBP5 190 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 KIF2CQ99661 725 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 TMEM134Q9H6X4 195 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.17□□□□□ -1.1
KRT39-203ENST00000578078 ATP10DQ9P241 1426 aa8.17□□□□□ -1.1
KRT39-203ENST00000578078 ABCA3Q99758 1704 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 BTBD11A6QL63 1104 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 ATP8B1O43520 1251 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 GTF2A1P52655 376 aaPredicted RBP8.16□□□□□ -1.1
KRT39-203ENST00000578078 FOSBP53539 338 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 MCTP1Q6DN14 999 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 SLC4A10Q6U841 1118 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 G2E3Q7L622 706 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 ANKRD44Q8N8A2 993 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 SLC43A3Q8NBI5 491 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 RDH13Q8NBN7 331 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 RAPGEF4Q8WZA2 1011 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 FAM198AQ9UFP1 575 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 AXIN2Q9Y2T1 843 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 CEP83Q9Y592 693 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 SPATA31A3Q5VYP0 1347 aa8.16□□□□□ -1.1
KRT39-203ENST00000578078 RNMTO43148 476 aaKnown RBP8.15□□□□□ -1.1
KRT39-203ENST00000578078 CPDO75976 1380 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 TUBB4AP04350 444 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 CALRP27797 417 aaKnown RBP8.15□□□□□ -1.1
KRT39-203ENST00000578078 CASQ1P31415 396 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 GUCA2AQ02747 115 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 GPS2Q13227 327 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 MPRIPQ6WCQ1 1025 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 TAS1R3Q7RTX0 852 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 SIRT2Q8IXJ6 389 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 LARGE2Q8N3Y3 721 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 DDX17Q92841 729 aaKnown RBP8.15□□□□□ -1.1
KRT39-203ENST00000578078 ARMC5Q96C12 935 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 LGR6Q9HBX8 967 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 RBM28Q9NW13 759 aaKnown RBP8.15□□□□□ -1.1
KRT39-203ENST00000578078 NLRP2Q9NX02 1062 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 PRKAG2Q9UGJ0 569 aa8.15□□□□□ -1.1
KRT39-203ENST00000578078 NHSL1Q5SYE7 1610 aa8.15□□□□□ -1.11
KRT39-203ENST00000578078 KDM4FA0A1W2PPD8 638 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 DHX16O60231 1041 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 GNAI3P08754 354 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 FBXO45P0C2W1 286 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 CCDC172P0C7W6 258 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 TATP17735 454 aaPredicted RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 GCGRP47871 477 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 MCM2P49736 904 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 EIF4A1P60842 406 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 SATB1Q01826 763 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 TRDNQ13061 729 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 BMS1Q14692 1282 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 CCDC144BQ3MJ40 725 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 HSP90AB3PQ58FF7 597 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 SWT1Q5T5J6 900 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 EGFLAMQ63HQ2 1017 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 CEP85Q6P2H3 762 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 METTL16Q86W50 562 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 NT5DC4Q86YG4 428 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 RGL4Q8IZJ4 473 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 GPT2Q8TD30 523 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 DHX38Q92620 1227 aaKnown RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 MEIS3Q99687 375 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 DCTPP1Q9H773 170 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 MED4Q9NPJ6 270 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 RAI14Q9P0K7 980 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 TMEM63CQ9P1W3 806 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 SPG7Q9UQ90 795 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 PPME1Q9Y570 386 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 F6X3S4 739 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 KIF2AO00139 706 aaPredicted RBP8.14□□□□□ -1.11
KRT39-203ENST00000578078 C21orf2O43822 256 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 GNAI2P04899 355 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 TPM4P67936 248 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 DPYDQ12882 1025 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 NCOA4Q13772 614 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 ECM1Q16610 540 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 SDE2Q6IQ49 451 aa8.14□□□□□ -1.11
KRT39-203ENST00000578078 BRINP3Q76B58 766 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms