RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 SERPINC1P01008 464 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 CREBRFQ8IUR6 639 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 KAT6BQ8WYB5 2073 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 CHMP4CQ96CF2 233 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 INCENPQ9NQS7 918 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
CUEDC1-206ENST00000577830 CCAR2Q8N163 923 aaKnown RBP17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 SPTLC2O15270 562 aa17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 BRD2P25440 801 aaKnown RBP17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 ADD1P35611 737 aaKnown RBP17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 ZAP70P43403 619 aa17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 TRDNQ13061 729 aa17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 USPL1Q5W0Q7 1092 aa17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 HELBQ8NG08 1087 aaPredicted RBP17.12■□□□□ 0.33
CUEDC1-206ENST00000577830 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 SCARF1Q14162 830 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 LTN1O94822 1766 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 ZNF335Q9H4Z2 1342 aaPredicted RBP17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 CTAGE5O15320 804 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 SFPQP23246 707 aaKnown RBP eCLIP17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 CFAP100Q494V2 611 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 DHX40Q8IX18 779 aaKnown RBP17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 NBPF26B4DH59 902 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 ZNF213O14771 459 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 FGAP02671 866 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 NBPF14Q5TI25 921 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 NBPF10Q6P3W6 841 aaKnown RBP17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 NBPF15Q8N660 670 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 PLBD2Q8NHP8 589 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 KIF18AQ8NI77 898 aa17.11■□□□□ 0.33
CUEDC1-206ENST00000577830 EYA2O00167 538 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 ATP1A3P13637 1013 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 TPM4P67936 248 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 NAA16Q6N069 864 aaPredicted RBP17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 ATG9AQ7Z3C6 839 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 PUS7LQ9H0K6 701 aaKnown RBP17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 PAXBP1Q9Y5B6 917 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 CARMIL3Q8ND23 1372 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 UTYO14607 1347 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 CLIC6Q96NY7 704 aa17.1■□□□□ 0.33
CUEDC1-206ENST00000577830 NRDCO43847 1150 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 FDPSP14324 419 aaKnown RBP17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 IL15P40933 162 aaPredicted RBP17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 DMTNQ08495 405 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 METTL24Q5JXM2 366 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 XAGE2Q96GT9 111 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 UBE2Q2LH0YL09 131 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 ZNF202O95125 648 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 TSGA10IPQ3SY00 556 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 ZMYM1Q5SVZ6 1142 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 ILDR1Q86SU0 546 aaPredicted RBP17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 SMARCC2Q8TAQ2 1214 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 DCAF5Q96JK2 942 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 CNNM1Q9NRU3 951 aa17.09■□□□□ 0.33
CUEDC1-206ENST00000577830 FOXO4P98177 505 aa17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 BRINP3Q76B58 766 aa17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 CMTR1Q8N1G2 835 aaKnown RBP17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 ST7Q9NRC1 585 aa17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 HELLSQ9NRZ9 838 aa17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 DNAI1Q9UI46 699 aa17.08■□□□□ 0.33
CUEDC1-206ENST00000577830 ERCC6LQ2NKX8 1250 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 LLPHQ9BRT6 129 aaKnown RBP17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 MARF1Q9Y4F3 1742 aaKnown RBP17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 KIF28PB7ZC32 967 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 EVA1CP58658 441 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 ZKSCAN3Q9BRR0 538 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 ALG1Q9BT22 464 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 KIAA1468Q9P260 1216 aa17.08■□□□□ 0.32
CUEDC1-206ENST00000577830 SNAP23O00161 211 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 CDK11BP21127 795 aaKnown RBP17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 PNOCQ13519 176 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 SLC9C2Q5TAH2 1124 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 B4E1Z4 1266 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 URI1O94763 535 aaPredicted RBP17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 EXOSC10Q01780 885 aaKnown RBP17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 ANKRD7Q92527 254 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 TRERF1Q96PN7 1200 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 DSCC1Q9BVC3 393 aa17.07■□□□□ 0.32
CUEDC1-206ENST00000577830 MYSM1Q5VVJ2 828 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 LDHAL6AQ6ZMR3 332 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 RBM43Q6ZSC3 357 aaKnown RBP17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 LINC00301Q8NCQ3 95 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 CGNQ9P2M7 1197 aaKnown RBP17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 MST1RQ04912 1400 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 GPAA1O43292 621 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 PFKFB1P16118 471 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 SYKP43405 635 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 LRRN4CLQ8ND94 238 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 MRFAP1L1Q96HT8 127 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 DHX16O60231 1041 aaKnown RBP17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 ZSWIM4Q9H7M6 989 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 SENP2Q9HC62 589 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 CTNNA3Q9UI47 895 aa17.06■□□□□ 0.32
CUEDC1-206ENST00000577830 CTIFO43310 598 aaKnown RBP17.05■□□□□ 0.32
CUEDC1-206ENST00000577830 CCZ1BP86790 482 aa17.05■□□□□ 0.32
CUEDC1-206ENST00000577830 CCZ1P86791 482 aaPredicted RBP17.05■□□□□ 0.32
CUEDC1-206ENST00000577830 TRIM29Q14134 588 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms