RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RPAP1Q9BWH6 1393 aaPredicted RBP16.39■□□□□ 0.21
RNF43-202ENST00000577625 TNS1Q9HBL0 1735 aaKnown RBP16.39■□□□□ 0.21
RNF43-202ENST00000577625 LAMA4Q16363 1823 aa16.39■□□□□ 0.21
RNF43-202ENST00000577625 CASTP20810 708 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 ZNF445P59923 1031 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 TXNRD1Q16881 649 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 CCDC24Q8N4L8 307 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 ZGPATQ8N5A5 531 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 IPO4Q8TEX9 1081 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 INTS4Q96HW7 963 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 ZSWIM6Q9HCJ5 1215 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 HMG20BQ9P0W2 317 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 MAST3O60307 1309 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 LRRFIP1Q32MZ4 808 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 TAF3Q5VWG9 929 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 CELF1Q92879 486 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 JAKMIP1Q96N16 626 aaKnown RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 NLRP3Q96P20 1036 aa16.38■□□□□ 0.21
RNF43-202ENST00000577625 BSDC1Q9NW68 430 aaPredicted RBP16.38■□□□□ 0.21
RNF43-202ENST00000577625 NUCB2P80303 420 aa16.37■□□□□ 0.21
RNF43-202ENST00000577625 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
RNF43-202ENST00000577625 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
RNF43-202ENST00000577625 GYS1P13807 737 aa16.37■□□□□ 0.21
RNF43-202ENST00000577625 CLEC17AQ6ZS10 378 aa16.37■□□□□ 0.21
RNF43-202ENST00000577625 NOL8Q76FK4 1167 aaKnown RBP16.37■□□□□ 0.21
RNF43-202ENST00000577625 TAF6LQ9Y6J9 622 aa16.37■□□□□ 0.21
RNF43-202ENST00000577625 ZFYP08048 801 aaPredicted RBP16.36■□□□□ 0.21
RNF43-202ENST00000577625 CPA1P15085 419 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 AK2P54819 239 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 OSBP2Q969R2 916 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 CYP46A1Q9Y6A2 500 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
RNF43-202ENST00000577625 MYH13Q9UKX3 1938 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 M0R2C6 588 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 PSMA5P28066 241 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 RXRBP28702 533 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 RUFY3Q7L099 469 aa16.36■□□□□ 0.21
RNF43-202ENST00000577625 PIH1D3Q9NQM4 214 aaKnown RBP16.36■□□□□ 0.21
RNF43-202ENST00000577625 RGPD3A6NKT7 1758 aaPredicted RBP16.35■□□□□ 0.21
RNF43-202ENST00000577625 RGPD4Q7Z3J3 1758 aa16.35■□□□□ 0.21
RNF43-202ENST00000577625 RASGRF1Q13972 1273 aa16.35■□□□□ 0.21
RNF43-202ENST00000577625 TTF1Q15361 905 aaPredicted RBP16.35■□□□□ 0.21
RNF43-202ENST00000577625 DSCC1Q9BVC3 393 aa16.35■□□□□ 0.21
RNF43-202ENST00000577625 MINPP1Q9UNW1 487 aa16.35■□□□□ 0.21
RNF43-202ENST00000577625 TM4SF1P30408 202 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 CNBD1Q8NA66 436 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 PDRG1Q9NUG6 133 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 TMEM51Q9NW97 253 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 LIMCH1Q9UPQ0 1083 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 DDX49Q9Y6V7 483 aaKnown RBP16.34■□□□□ 0.21
RNF43-202ENST00000577625 PLSCR1O15162 318 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 RPS8P62241 208 aaKnown RBP16.34■□□□□ 0.21
RNF43-202ENST00000577625 COL9A3Q14050 684 aaPredicted RBP16.34■□□□□ 0.21
RNF43-202ENST00000577625 KRT32Q14532 448 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 MYRIPQ8NFW9 859 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 APPBP2Q92624 585 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.21
RNF43-202ENST00000577625 CCDC39Q9UFE4 941 aa16.34■□□□□ 0.21
RNF43-202ENST00000577625 NPHP1O15259 732 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 HSPD1P10809 573 aaKnown RBP16.33■□□□□ 0.2
RNF43-202ENST00000577625 BCAMP50895 628 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 ADD2P35612 726 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 UBE4AQ14139 1066 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 WASHC4Q2M389 1173 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 PRR5LQ6MZQ0 368 aa16.33■□□□□ 0.2
RNF43-202ENST00000577625 ZNF804BA4D1E1 1349 aa16.32■□□□□ 0.2
RNF43-202ENST00000577625 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
RNF43-202ENST00000577625 CYP21A2P08686 494 aa16.32■□□□□ 0.2
RNF43-202ENST00000577625 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
RNF43-202ENST00000577625 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
RNF43-202ENST00000577625 PUS7LQ9H0K6 701 aaKnown RBP16.32■□□□□ 0.2
RNF43-202ENST00000577625 RGS17Q9UGC6 210 aaPredicted RBP16.32■□□□□ 0.2
RNF43-202ENST00000577625 FOXP2O15409 715 aa16.31■□□□□ 0.2
RNF43-202ENST00000577625 APBA3O96018 575 aa16.31■□□□□ 0.2
RNF43-202ENST00000577625 HMGB2P26583 209 aaKnown RBP16.31■□□□□ 0.2
RNF43-202ENST00000577625 ZSCAN25Q6NSZ9 544 aa16.31■□□□□ 0.2
RNF43-202ENST00000577625 ALDH8A1Q9H2A2 487 aaPredicted RBP16.31■□□□□ 0.2
RNF43-202ENST00000577625 IDH1O75874 414 aaKnown RBP16.31■□□□□ 0.2
RNF43-202ENST00000577625 PKP1Q13835 747 aa16.31■□□□□ 0.2
RNF43-202ENST00000577625 SLC9C2Q5TAH2 1124 aa16.31■□□□□ 0.2
RNF43-202ENST00000577625 ZSCAN31Q96LW9 406 aaPredicted RBP16.31■□□□□ 0.2
RNF43-202ENST00000577625 ANKRD31Q8N7Z5 1873 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 RPS6KB1P23443 525 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 UBE3CQ15386 1083 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 COL1A1P02452 1464 aaPredicted RBP16.3■□□□□ 0.2
RNF43-202ENST00000577625 SERPINB2P05120 415 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 PDE6AP16499 860 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 DDR1Q08345 913 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 PRIMPOLQ96LW4 560 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 LARP6Q9BRS8 491 aaKnown RBP16.3■□□□□ 0.2
RNF43-202ENST00000577625 SH2B1Q9NRF2 756 aaPredicted RBP16.3■□□□□ 0.2
RNF43-202ENST00000577625 NRXN2Q9P2S2 1712 aa16.3■□□□□ 0.2
RNF43-202ENST00000577625 TCRBV5S4A2TA0A5A2 114 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 GPAA1O43292 621 aa16.29■□□□□ 0.2
RNF43-202ENST00000577625 LARGE1O95461 756 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms