RNA–Protein interactions for RNA: ENST00000572949.5

USP6-204, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 7,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-204ENST00000572949 PPANQ9NQ55 473 aaKnown RBP10.68□□□□□ -0.7
USP6-204ENST00000572949 PI4KAP2A4QPH2 592 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 GNAT2P19087 354 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 ALDH3A1P30838 453 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 PPP2R5DQ14738 602 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 PI4KAP1Q8N8J0 262 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 IRAK4Q9NWZ3 460 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 OATP04181 439 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 MUM1L1Q5H9M0 696 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 CTAGE1Q96RT6 745 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 CARD10Q9BWT7 1032 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 BCS1LQ9Y276 419 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 KLF18A0A0U1RQI7 1052 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 PPFIA3O75145 1194 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 UFL1O94874 794 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 ALG1Q9BT22 464 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 SYKP43405 635 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 UTP14CQ5TAP6 766 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 LARP6Q9BRS8 491 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.67□□□□□ -0.7
USP6-204ENST00000572949 HMG20BQ9P0W2 317 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 SAP30BPQ9UHR5 308 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 TACC3Q9Y6A5 838 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 PIK3R4Q99570 1358 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 SLC9C2Q5TAH2 1124 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 MAGEB6Q8N7X4 407 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 ZNF526Q8TF50 670 aaPredicted RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 TRMT1Q9NXH9 659 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 RTL9Q8NET4 1388 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 ATP2C2O75185 946 aa10.67□□□□□ -0.7
USP6-204ENST00000572949 PARP1P09874 1014 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 RPUSD2Q8IZ73 545 aaKnown RBP10.67□□□□□ -0.7
USP6-204ENST00000572949 PALM3A6NDB9 673 aaPredicted RBP10.66□□□□□ -0.7
USP6-204ENST00000572949 PPP1R7Q15435 360 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 DCAF17Q5H9S7 520 aaPredicted RBP10.66□□□□□ -0.7
USP6-204ENST00000572949 VPS52Q8N1B4 723 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 CHST3Q7LGC8 479 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 NOX5Q96PH1 765 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 ATXN8OSP0DMR3 200 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 GSDMDP57764 484 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 DPP8Q6V1X1 898 aaPredicted RBP10.66□□□□□ -0.7
USP6-204ENST00000572949 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 ESYT2A0FGR8 921 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 CHMP2AO43633 222 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 CSPG5O95196 566 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 FCHSD1Q86WN1 690 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 MSL1Q68DK7 614 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 TEX11Q8IYF3 940 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 DCPSQ96C86 337 aaKnown RBP10.66□□□□□ -0.7
USP6-204ENST00000572949 NCAPGQ9BPX3 1015 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 CLSTN2Q9H4D0 955 aa10.66□□□□□ -0.7
USP6-204ENST00000572949 TFIP11Q9UBB9 837 aaKnown RBP10.66□□□□□ -0.7
USP6-204ENST00000572949 C4orf50Q6ZRC1 276 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 AFAP1L2Q8N4X5 818 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 UAP1Q16222 522 aaPredicted RBP10.65□□□□□ -0.7
USP6-204ENST00000572949 NEK11Q8NG66 645 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 IFT140Q96RY7 1462 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 GPCPD1Q9NPB8 672 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.65□□□□□ -0.7
USP6-204ENST00000572949 MAST3O60307 1309 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 PTGS1P23219 599 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 RPL13P26373 211 aaKnown RBP10.65□□□□□ -0.7
USP6-204ENST00000572949 GJB2P29033 226 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 ARID4AP29374 1257 aaPredicted RBP10.65□□□□□ -0.7
USP6-204ENST00000572949 ALDH1L2Q3SY69 923 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 GRPEL1Q9HAV7 217 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 ANKFY1Q9P2R3 1169 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 POLA1P09884 1462 aaPredicted RBP10.65□□□□□ -0.7
USP6-204ENST00000572949 KRT2P35908 639 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 FMNL3Q8IVF7 1028 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 MIGA1Q8NAN2 632 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 XAGE3Q8WTP9 111 aa10.65□□□□□ -0.7
USP6-204ENST00000572949 IRX5P78411 483 aaPredicted RBP10.65□□□□□ -0.71
USP6-204ENST00000572949 CCDC25Q86WR0 208 aa10.65□□□□□ -0.71
USP6-204ENST00000572949 TTC14Q96N46 770 aa10.65□□□□□ -0.71
USP6-204ENST00000572949 GGA1Q9UJY5 639 aa10.65□□□□□ -0.71
USP6-204ENST00000572949 KIAA1107Q9UPP5 1409 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 CPXCR1Q8N123 301 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 METTL13Q8N6R0 699 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 CDCA7Q9BWT1 371 aaPredicted RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 MCM7P33993 719 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 PAGR1Q9BTK6 254 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 DDX19AQ9NUU7 478 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 BICDL2A1A5D9 508 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 WDR46O15213 610 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 DTHD1Q6ZMT9 781 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 SRGAP1Q7Z6B7 1085 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 CCDC110Q8TBZ0 833 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 EMILIN1Q9Y6C2 1016 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 IRS4O14654 1257 aaPredicted RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 KRT19P08727 400 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 EPB41P11171 864 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 ERCC5P28715 1186 aaPredicted RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 FBXO31Q5XUX0 539 aaPredicted RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 GADL1Q6ZQY3 521 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 CSRNP2Q9H175 543 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 PRPF6O94906 941 aaKnown RBP10.64□□□□□ -0.71
USP6-204ENST00000572949 ITIH3Q06033 890 aa10.64□□□□□ -0.71
USP6-204ENST00000572949 COPS6Q7L5N1 327 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms