RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	FBLIM1	Q8WUP2	373 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	VTI1A	Q96AJ9	217 aa		7.5	□□□□□ -1.21
UBR1-209	ENST00000569243	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	7.5	□□□□□ -1.21
UBR1-209	ENST00000569243		H3BRJ5	948 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	WEE1	P30291	646 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	NUTM2G	Q5VZR2	741 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	CDPF1	Q6NVV7	123 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	SLC7A3	Q8WY07	619 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	ARX	Q96QS3	562 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	POP1	Q99575	1024 aa	Known RBP	7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	PBX4	Q9BYU1	374 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	OSGEP	Q9NPF4	335 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	SLC5A6	Q9Y289	635 aa		7.49	□□□□□ -1.21
UBR1-209	ENST00000569243	USP11	P51784	963 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	CFAP70	Q5T0N1	1121 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	BCL7C	Q8WUZ0	217 aa	Predicted RBP	7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	TMEM40	Q8WWA1	233 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	WNT8B	Q93098	351 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	ADAM19	Q9H013	955 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	PRKAG2	Q9UGJ0	569 aa		7.48	□□□□□ -1.21
UBR1-209	ENST00000569243	CABP4	P57796	275 aa		7.47	□□□□□ -1.21
UBR1-209	ENST00000569243	MESP2	Q0VG99	397 aa		7.47	□□□□□ -1.21
UBR1-209	ENST00000569243	SPRED2	Q7Z698	418 aa		7.47	□□□□□ -1.21
UBR1-209	ENST00000569243	ATG4D	Q86TL0	474 aa	Predicted RBP	7.47	□□□□□ -1.21
UBR1-209	ENST00000569243	CILP2	Q8IUL8	1156 aa		7.47	□□□□□ -1.21
UBR1-209	ENST00000569243	UBAP1L	F5GYI3	381 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	TIAF1	O95411	115 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	CFP	P27918	469 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	DUSP27	Q5VZP5	1158 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	LCNL1	Q6ZST4	164 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	GLIS3	Q8NEA6	775 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	FAM200A	Q8TCP9	573 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	FAM84A	Q96KN4	292 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	TOX2	Q96NM4	488 aa		7.46	□□□□□ -1.22
UBR1-209	ENST00000569243	DRD2	P14416	443 aa		7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	ELOA	Q14241	798 aa	Known RBP	7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	SWI5	Q1ZZU3	235 aa		7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	WFDC3	Q8IUB2	231 aa		7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	SMG8	Q8ND04	991 aa	Known RBP	7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	RC3H2	Q9HBD1	1191 aa	Known RBP	7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	CYP4F12	Q9HCS2	524 aa		7.45	□□□□□ -1.22
UBR1-209	ENST00000569243	KIF4A	O95239	1232 aa		7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	TTC39B	Q5VTQ0	682 aa	Predicted RBP	7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	HGSNAT	Q68CP4	663 aa		7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	NCAPG2	Q86XI2	1143 aa		7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	GATA6	Q92908	595 aa		7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	TMPRSS13	Q9BYE2	586 aa		7.44	□□□□□ -1.22
UBR1-209	ENST00000569243	CYP2E1	P05181	493 aa	Predicted RBP	7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	ZNF765	Q7L2R6	523 aa		7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	C1QL4	Q86Z23	238 aa		7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	CEP120	Q8N960	986 aa		7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	ZNF777	Q9ULD5	760 aa	Predicted RBP	7.43	□□□□□ -1.22
UBR1-209	ENST00000569243	RFX1	P22670	979 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	RAP1GAP	P47736	663 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	ARL4D	P49703	201 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	BNIP3	Q12983	259 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	SUGCT	Q9HAC7	445 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	LMCD1	Q9NZU5	365 aa		7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	ACIN1	Q9UKV3	1341 aa	Known RBP	7.42	□□□□□ -1.22
UBR1-209	ENST00000569243	LRRC10B	A6NIK2	292 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	RNASE1	P07998	156 aa	Known RBP	7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	C19orf57	Q0VDD7	668 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	COX20	Q5RI15	118 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	ETFBKMT	Q8IXQ9	262 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	LRRC56	Q8IYG6	542 aa	Predicted RBP	7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	STK11IP	Q8N1F8	1099 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	USP26	Q9BXU7	913 aa		7.41	□□□□□ -1.22
UBR1-209	ENST00000569243	C2CD4A	Q8NCU7	369 aa	Predicted RBP	7.4	□□□□□ -1.22
UBR1-209	ENST00000569243	EZH1	Q92800	747 aa	Predicted RBP	7.4	□□□□□ -1.22
UBR1-209	ENST00000569243	YIPF2	Q9BWQ6	316 aa		7.4	□□□□□ -1.22
UBR1-209	ENST00000569243	MBNL3	Q9NUK0	354 aa	Known RBP	7.4	□□□□□ -1.22
UBR1-209	ENST00000569243	NOVA2	Q9UNW9	492 aa	Known RBP	7.4	□□□□□ -1.22
UBR1-209	ENST00000569243	DLGAP3	O95886	979 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	ZSCAN22	P10073	491 aa	Predicted RBP	7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	CYP27A1	Q02318	531 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	ECM1	Q16610	540 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	TTLL10	Q6ZVT0	673 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	KRTAP9-8	Q9BYQ0	159 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	ADAMTS6	Q9UKP5	1117 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	JAG2	Q9Y219	1238 aa		7.39	□□□□□ -1.23
UBR1-209	ENST00000569243	LOC100289279	A0A1B0GTE1	492 aa		7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	SRPK2	P78362	688 aa	Known RBP	7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	SIAH1	Q8IUQ4	282 aa		7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	LRRN4CL	Q8ND94	238 aa		7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	PIK3R5	Q8WYR1	880 aa		7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	ABI2	Q9NYB9	513 aa	Predicted RBP	7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	7.38	□□□□□ -1.23
UBR1-209	ENST00000569243	FUT4	P22083	530 aa		7.37	□□□□□ -1.23
UBR1-209	ENST00000569243	ATG7	O95352	703 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	NFIC	P08651	508 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	CD8B	P10966	210 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	ACPP	P15309	386 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	SOX4	Q06945	474 aa	Predicted RBP	7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	FAM69C	Q0P6D2	419 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	OCLN	Q16625	522 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	MLANA	Q16655	118 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	KANSL3	Q9P2N6	904 aa		7.36	□□□□□ -1.23
UBR1-209	ENST00000569243	SOX1	O00570	391 aa	Predicted RBP	7.35	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms