RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 CALM1P0DP23 149 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CALM2P0DP24 149 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CALM3P0DP25 149 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CHMLP26374 656 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 ARHGAP25P42331 645 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 ATP11AP98196 1134 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CALCOCO2Q13137 446 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 GSTA5Q7RTV2 222 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 LMNTD2Q8IXW0 634 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 ZNF75DP51815 510 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 FMNL3Q8IVF7 1028 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CCDC26Q8TAB7 109 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 ELF2Q15723 593 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 CEP85Q6P2H3 762 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 DHX32Q7L7V1 743 aaKnown RBP18.73■□□□□ 0.59
TSC2-222ENST00000568454 CCDC110Q8TBZ0 833 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 PPP1R9BQ96SB3 815 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 KCNK9Q9NPC2 374 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 WDHD1O75717 1129 aaPredicted RBP18.73■□□□□ 0.59
TSC2-222ENST00000568454 SF3B2Q13435 895 aaKnown RBP18.73■□□□□ 0.59
TSC2-222ENST00000568454 NKIRAS1Q9NYS0 192 aa18.73■□□□□ 0.59
TSC2-222ENST00000568454 RTL9Q8NET4 1388 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 IQUBQ8NA54 791 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 CLSTN2Q9H4D0 955 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 MTUS1Q9ULD2 1270 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 GOLGA6CA6NDK9 693 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 ZPR1O75312 459 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 GOLGA6DP0CG33 693 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 PPP1R2P41236 205 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 UBLCP1Q8WVY7 318 aaPredicted RBP18.72■□□□□ 0.59
TSC2-222ENST00000568454 STMN2Q93045 179 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 GOLGA6AQ9NYA3 693 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 MKRN1Q9UHC7 482 aaKnown RBP18.72■□□□□ 0.59
TSC2-222ENST00000568454 SMIM23A6NLE4 172 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 ARID5AQ03989 594 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 TRAF1Q13077 416 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 SEC62Q99442 399 aaKnown RBP18.72■□□□□ 0.59
TSC2-222ENST00000568454 POLR3AO14802 1390 aaPredicted RBP18.72■□□□□ 0.59
TSC2-222ENST00000568454 DDX23Q9BUQ8 820 aaKnown RBP18.72■□□□□ 0.59
TSC2-222ENST00000568454 CARD6Q9BX69 1037 aa18.72■□□□□ 0.59
TSC2-222ENST00000568454 KRT2P35908 639 aa18.71■□□□□ 0.59
TSC2-222ENST00000568454 ANKRD13DQ6ZTN6 518 aa18.71■□□□□ 0.59
TSC2-222ENST00000568454 ATP2A2P16615 1042 aaKnown RBP18.71■□□□□ 0.59
TSC2-222ENST00000568454 IL15P40933 162 aaPredicted RBP18.71■□□□□ 0.59
TSC2-222ENST00000568454 CACNA2D3Q8IZS8 1091 aa18.71■□□□□ 0.59
TSC2-222ENST00000568454 MRVI1Q9Y6F6 885 aa18.71■□□□□ 0.59
TSC2-222ENST00000568454 CCDC63Q8NA47 563 aa18.71■□□□□ 0.58
TSC2-222ENST00000568454 LRRC45Q96CN5 670 aa18.71■□□□□ 0.58
TSC2-222ENST00000568454 SYNCQ9H7C4 482 aa18.71■□□□□ 0.58
TSC2-222ENST00000568454 GRM8O00222 908 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 SNRPA1P09661 255 aaKnown RBP18.7■□□□□ 0.58
TSC2-222ENST00000568454 CLNS1AP54105 237 aaKnown RBP18.7■□□□□ 0.58
TSC2-222ENST00000568454 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 SAMM50Q9Y512 469 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 RLBP1P12271 317 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 C8orf74Q6P047 294 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 BICD1Q96G01 975 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.7■□□□□ 0.586e-6■■□□□ 12.1
TSC2-222ENST00000568454 SLC4A4Q9Y6R1 1079 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 IGSF22Q8N9C0 903 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 HLA-DOAP06340 250 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 GPTP24298 496 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 KRT79Q5XKE5 535 aa18.7■□□□□ 0.58
TSC2-222ENST00000568454 VIMP08670 466 aaKnown RBP18.69■□□□□ 0.58
TSC2-222ENST00000568454 GSTO1P78417 241 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 CYP26C1Q6V0L0 522 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 HEATR3Q7Z4Q2 680 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 CIB2O75838 187 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 PPP1R7Q15435 360 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 ATP2B3Q16720 1220 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 CROCCP2Q86T23 111 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 PAG1Q9NWQ8 432 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 ATP6V0A2Q9Y487 856 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 RAPGEF3O95398 923 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 MAP7D1Q3KQU3 841 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 C14orf93Q9H972 538 aaKnown RBP18.69■□□□□ 0.58
TSC2-222ENST00000568454 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 C8orf58Q8NAV2 365 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 RGS22Q8NE09 1264 aa18.69■□□□□ 0.58
TSC2-222ENST00000568454 CEP128Q6ZU80 1094 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 C6orf50Q9HD87 102 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 PCK1P35558 622 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 CHPF2Q9P2E5 772 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 PABPN1LA6NDY0 278 aaKnown RBP18.68■□□□□ 0.58
TSC2-222ENST00000568454 ARHGAP6O43182 974 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 TSPY3P0CV98 308 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 TSPY8P0CW00 308 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 CCDC25Q86WR0 208 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 FEZ2Q9UHY8 353 aaPredicted RBP18.68■□□□□ 0.58
TSC2-222ENST00000568454 A0A1B0GVL5 298 aa18.68■□□□□ 0.58
TSC2-222ENST00000568454 TMEM110-MUSTN1A8MSY1 372 aa18.67■□□□□ 0.58
TSC2-222ENST00000568454 RNF113AO15541 343 aaKnown RBP18.67■□□□□ 0.58
TSC2-222ENST00000568454 HPDP32754 393 aaPredicted RBP18.67■□□□□ 0.58
TSC2-222ENST00000568454 NAPAP54920 295 aa18.67■□□□□ 0.58
TSC2-222ENST00000568454 CBX8Q9HC52 389 aa18.67■□□□□ 0.58
TSC2-222ENST00000568454 CABP5Q9NP86 173 aa18.67■□□□□ 0.58
TSC2-222ENST00000568454 PHF8Q9UPP1 1060 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms