RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 E9PSI1 815 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 EML1O00423 815 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 AMPHP49418 695 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 GAS6Q14393 721 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 CCDC27Q2M243 656 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 NUTM2GQ5VZR2 741 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 TRMT2AQ8IZ69 625 aaKnown RBP7.99□□□□□ -1.13
CAPN3-218ENST00000568153 CNTNAP3BQ96NU0 1288 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 C2orf49Q9BVC5 232 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-218ENST00000568153 CNTNAP3Q9BZ76 1288 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 STK17AQ9UEE5 414 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 ZNF521Q96K83 1311 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 MAPK8IP3Q9UPT6 1336 aa7.99□□□□□ -1.13
CAPN3-218ENST00000568153 XRN1Q8IZH2 1706 aaKnown RBP7.98□□□□□ -1.13
CAPN3-218ENST00000568153 H7C1W4 665 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 TXLNAP40222 546 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 TMPOP42166 694 aaKnown RBP7.98□□□□□ -1.13
CAPN3-218ENST00000568153 FKBP5Q13451 457 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-218ENST00000568153 STAG2Q8N3U4 1231 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 KCNH5Q8NCM2 988 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 AIDAQ96BJ3 306 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
CAPN3-218ENST00000568153 RCAN3Q9UKA8 241 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 ZNF232Q9UNY5 417 aa7.98□□□□□ -1.13
CAPN3-218ENST00000568153 RRP7AQ9Y3A4 280 aaKnown RBP7.98□□□□□ -1.13
CAPN3-218ENST00000568153 CHD2O14647 1828 aaKnown RBP7.97□□□□□ -1.13
CAPN3-218ENST00000568153 ATP4AP20648 1035 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 ATP2B4P23634 1241 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 MSX1P28360 303 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 HIRAP54198 1017 aaPredicted RBP7.97□□□□□ -1.13
CAPN3-218ENST00000568153 RIPK4P57078 832 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 EIF4A2Q14240 407 aaKnown RBP7.97□□□□□ -1.13
CAPN3-218ENST00000568153 HSP90AB2PQ58FF8 381 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 DUSP27Q5VZP5 1158 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 GPAMQ9HCL2 828 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 CHMP3Q9Y3E7 222 aa7.97□□□□□ -1.13
CAPN3-218ENST00000568153 HMOX1P09601 288 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 PRKAR2BP31323 418 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 UBAP2LQ14157 1087 aaKnown RBP7.96□□□□□ -1.14
CAPN3-218ENST00000568153 GTPBP3Q969Y2 492 aaKnown RBP7.96□□□□□ -1.14
CAPN3-218ENST00000568153 NUCKS1Q9H1E3 243 aaKnown RBP7.96□□□□□ -1.14
CAPN3-218ENST00000568153 HCN4Q9Y3Q4 1203 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 MAP3K19Q56UN5 1328 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 RNF123Q5XPI4 1314 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 MSH6P52701 1360 aa7.96□□□□□ -1.14
CAPN3-218ENST00000568153 NKTRP30414 1462 aaKnown RBP7.95□□□□□ -1.14
CAPN3-218ENST00000568153 LMTK3Q96Q04 1460 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 GPR25O00155 361 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 GCP02774 474 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 SLURP2P0DP57 97 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 XPCQ01831 940 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-218ENST00000568153 NFE2L2Q16236 605 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 SULT6B1Q6IMI4 303 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 IP6K1Q92551 441 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 MYH16Q9H6N6 1097 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 ZDHHC3Q9NYG2 299 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 ZNF335Q9H4Z2 1342 aaPredicted RBP7.95□□□□□ -1.14
CAPN3-218ENST00000568153 OVOS2A0A0J9YW53 1432 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 OVOS2Q6IE36 1432 aa7.95□□□□□ -1.14
CAPN3-218ENST00000568153 C1orf167Q5SNV9 1468 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 SSFA2P28290 1259 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 SCNN1AP37088 669 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 IRX6P78412 446 aaPredicted RBP7.94□□□□□ -1.14
CAPN3-218ENST00000568153 CALD1Q05682 793 aaKnown RBP7.94□□□□□ -1.14
CAPN3-218ENST00000568153 PHLDB3Q6NSJ2 640 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 CAPN12Q6ZSI9 719 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 FBXO41Q8TF61 875 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 PHACTR3Q96KR7 559 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 RUBCNLQ9H714 662 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 SBNO1A3KN83 1393 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 KIF24Q5T7B8 1368 aa7.94□□□□□ -1.14
CAPN3-218ENST00000568153 HOXC9P31274 260 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 LMOD3Q0VAK6 560 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 LBRQ14739 615 aaKnown RBP7.93□□□□□ -1.14
CAPN3-218ENST00000568153 ALDH16A1Q8IZ83 802 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-218ENST00000568153 C1orf216Q8TAB5 229 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 C7orf43Q8WVR3 580 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 KLRG1Q96E93 195 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 NGLY1Q96IV0 654 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 MKNK1Q9BUB5 465 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 PHACTR1Q9C0D0 580 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 CRISPLD1Q9H336 500 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 PPP4R2Q9NY27 417 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 IL16Q14005 1332 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 NPHP3Q7Z494 1330 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 DCCP43146 1447 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 COL3A1P02461 1466 aaPredicted RBP7.93□□□□□ -1.14
CAPN3-218ENST00000568153 NWD1Q149M9 1564 aa7.93□□□□□ -1.14
CAPN3-218ENST00000568153 ZBTB7CA1YPR0 619 aa7.92□□□□□ -1.14
CAPN3-218ENST00000568153 TATP17735 454 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-218ENST00000568153 RRP1P56182 461 aaKnown RBP7.92□□□□□ -1.14
CAPN3-218ENST00000568153 PDE4CQ08493 712 aa7.92□□□□□ -1.14
CAPN3-218ENST00000568153 FOXR1Q6PIV2 292 aa7.92□□□□□ -1.14
CAPN3-218ENST00000568153 ARHGEF25Q86VW2 580 aa7.92□□□□□ -1.14
CAPN3-218ENST00000568153 LTV1Q96GA3 475 aaPredicted RBP7.92□□□□□ -1.14
CAPN3-218ENST00000568153 QTRT2Q9H974 415 aaKnown RBP7.92□□□□□ -1.14
CAPN3-218ENST00000568153 FLT4P35916 1363 aa7.92□□□□□ -1.14
CAPN3-218ENST00000568153 ADAMTS2O95450 1211 aa7.91□□□□□ -1.14
CAPN3-218ENST00000568153 CT47B1P0C2W7 299 aaPredicted RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms