RNA–Protein interactions for RNA: ENST00000567284.6

FANCA-223, Transcript of FA complementation group A, human

TSL 3

Gene FANCA, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCA-223	ENST00000567284	C15orf52	Q6ZUT6	534 aa	Known RBP	11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	COA1	Q9GZY4	146 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	HMG20B	Q9P0W2	317 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	TIAM2	Q8IVF5	1701 aa		11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	ZNF646	O15015	1829 aa	Predicted RBP	11.42	□□□□□ -0.58
FANCA-223	ENST00000567284	COL4A5	P29400	1685 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	COL1A1	P02452	1464 aa	Predicted RBP	11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	GOLIM4	O00461	696 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	GSPT1	P15170	499 aa	Known RBP	11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	KIAA2012	Q0VF49	1180 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	RASGRF1	Q13972	1273 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	TBC1D9	Q6ZT07	1266 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	NIM1K	Q8IY84	436 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	SPATA5	Q8NB90	893 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	TDRD7	Q8NHU6	1098 aa	Known RBP	11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	HAUS7	Q99871	368 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	OSBPL3	Q9H4L5	887 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	DENND2A	Q9ULE3	1009 aa		11.41	□□□□□ -0.58
FANCA-223	ENST00000567284	PRELP	P51888	382 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	GTF2I	P78347	998 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	ANTXR1	Q9H6X2	564 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	KCNQ5	Q9NR82	932 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	PAG1	Q9NWQ8	432 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	ABCF2	Q9UG63	623 aa		11.4	□□□□□ -0.58
FANCA-223	ENST00000567284	CYP2E1	P05181	493 aa	Predicted RBP	11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	IL1R1	P14778	569 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	SDS	P20132	328 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	CNTROB	Q8N137	903 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	JDP2	Q8WYK2	163 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	ZNF512B	Q96KM6	892 aa	Predicted RBP	11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	FSD1	Q9BTV5	496 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	MXD3	Q9BW11	206 aa		11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	PIH1D3	Q9NQM4	214 aa	Known RBP	11.39	□□□□□ -0.59
FANCA-223	ENST00000567284	LTBP3	Q9NS15	1303 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	DCAF8L1	A6NGE4	600 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	YDJC	A8MPS7	323 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	SEMA3E	O15041	775 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	RAD17	O75943	681 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	TTLL5	Q6EMB2	1281 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	EVI5L	Q96CN4	794 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	VPS33B	Q9H267	617 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	RNF181	Q9P0P0	153 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	LRP2BP	Q9P2M1	347 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	MAST2	Q6P0Q8	1798 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	ADAMTSL1	Q8N6G6	1762 aa		11.38	□□□□□ -0.59
FANCA-223	ENST00000567284	USP17L3	A6NCW0	530 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	USP17L4	A6NCW7	530 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284		F8W031	263 aa	Predicted RBP	11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	GRIN3B	O60391	1043 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	IDH1	O75874	414 aa	Known RBP	11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	LMNB1	P20700	586 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	USP17L1	Q7RTZ2	530 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	PODN	Q7Z5L7	613 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	WDR66	Q8TBY9	1149 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	RAI14	Q9P0K7	980 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	ZNRF3	Q9ULT6	936 aa		11.37	□□□□□ -0.59
FANCA-223	ENST00000567284	EIF6	P56537	245 aa	Known RBP	11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	TTF1	Q15361	905 aa	Predicted RBP	11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	SLFNL1	Q499Z3	407 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	BMP2KL	Q5H9B9	411 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	MFSD14B	Q5SR56	506 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	C9orf131	Q5VYM1	1079 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	ERICH6	Q7L0X2	663 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	GJA3	Q9Y6H8	435 aa		11.36	□□□□□ -0.59
FANCA-223	ENST00000567284	PSMD14	O00487	310 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	CHGB	P05060	677 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	LDHB	P07195	334 aa	Known RBP	11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	GRIK5	Q16478	980 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	CIAPIN1	Q6FI81	312 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	DZIP1	Q86YF9	867 aa	Known RBP	11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	ZGPAT	Q8N5A5	531 aa	Known RBP	11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	KBTBD3	Q8NAB2	608 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	ECM29	Q5VYK3	1845 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	FAM205A	Q6ZU69	1335 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	ZNF541	Q9H0D2	1346 aa		11.35	□□□□□ -0.59
FANCA-223	ENST00000567284	CDK5RAP2	Q96SN8	1893 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	PRDX5	P30044	214 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	CXCL9	Q07325	125 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	MAP3K12	Q12852	859 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	DACT2	Q5SW24	774 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	STRIP1	Q5VSL9	837 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	SPTY2D1	Q68D10	685 aa	Predicted RBP	11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	CERS5	Q8N5B7	392 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	MAGEB6	Q8N7X4	407 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	TBC1D22A	Q8WUA7	517 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	11.34	□□□□□ -0.59	5e-11	■■■■■ 39.3
FANCA-223	ENST00000567284	DIAPH3	Q9NSV4	1193 aa		11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	PDS5A	Q29RF7	1337 aa	Known RBP	11.34	□□□□□ -0.59
FANCA-223	ENST00000567284	RNF113A	O15541	343 aa	Known RBP	11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	CDC45	O75419	566 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	CYP7A1	P22680	504 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	SCNN1D	P51172	638 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	NMI	Q13287	307 aa	Predicted RBP	11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	TNIP1	Q15025	636 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	SLC9C2	Q5TAH2	1124 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	NAA16	Q6N069	864 aa	Predicted RBP	11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	ZSCAN25	Q6NSZ9	544 aa		11.33	□□□□□ -0.6
FANCA-223	ENST00000567284	CWC27	Q6UX04	472 aa	Known RBP	11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms