RNA–Protein interactions for RNA: ENST00000566772.1

KARS-208, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 644 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-208ENST00000566772 PLD4Q96BZ4 506 aa8.15□□□□□ -1.1
KARS-208ENST00000566772 ZFYVE1Q9HBF4 777 aa8.15□□□□□ -1.1
KARS-208ENST00000566772 SEC31BQ9NQW1 1179 aa8.15□□□□□ -1.1
KARS-208ENST00000566772 FIGNL2A6NMB9 653 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 CAPN5O15484 640 aaPredicted RBP8.14□□□□□ -1.11
KARS-208ENST00000566772 MCM4P33991 863 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 KANK3Q6NY19 840 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 NLRP8Q86W28 1048 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 RPUSD2Q8IZ73 545 aaKnown RBP8.14□□□□□ -1.11
KARS-208ENST00000566772 TRPM4Q8TD43 1214 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 APPBP2Q92624 585 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 HHIPQ96QV1 700 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
KARS-208ENST00000566772 PCDHB5Q9Y5E4 795 aa8.14□□□□□ -1.11
KARS-208ENST00000566772 ZCCHC6Q5VYS8 1495 aaKnown RBP8.13□□□□□ -1.11
KARS-208ENST00000566772 ROBO2Q9HCK4 1378 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 ARID4BQ4LE39 1312 aaPredicted RBP8.13□□□□□ -1.11
KARS-208ENST00000566772 KIF4AO95239 1232 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 F11P03951 625 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 ITPKAP23677 461 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 GIPRP48546 466 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 GYS2P54840 703 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 HYAL2Q12891 473 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 DDR2Q16832 855 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 FBXW10Q5XX13 1052 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 PGBD3Q8N328 593 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 CEP120Q8N960 986 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 JARID2Q92833 1246 aaPredicted RBP8.13□□□□□ -1.11
KARS-208ENST00000566772 PRKAB1Q9Y478 270 aa8.13□□□□□ -1.11
KARS-208ENST00000566772 PARNO95453 639 aaKnown RBP8.12□□□□□ -1.11
KARS-208ENST00000566772 RPS26P62854 115 aaKnown RBP8.12□□□□□ -1.11
KARS-208ENST00000566772 AMPD3Q01432 767 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 FAAP100Q0VG06 881 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 IFRD2Q12894 506 aaPredicted RBP8.12□□□□□ -1.11
KARS-208ENST00000566772 SEPT6Q14141 434 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 HOMER1Q86YM7 354 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 TRIM42Q8IWZ5 723 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 FERD3LQ96RJ6 166 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 CRBNQ96SW2 442 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 GAS2L1Q99501 681 aaPredicted RBP8.12□□□□□ -1.11
KARS-208ENST00000566772 TLR7Q9NYK1 1049 aaKnown RBP8.12□□□□□ -1.11
KARS-208ENST00000566772 ACTR10Q9NZ32 417 aa8.12□□□□□ -1.11
KARS-208ENST00000566772 A0A096LPE4 126 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 A0A1W2PPZ6 126 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 TTLL8A6PVC2 850 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 PDPK1O15530 556 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 PSAPP07602 524 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 NFKB1P19838 968 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 ZNF157P51786 506 aaPredicted RBP8.11□□□□□ -1.11
KARS-208ENST00000566772 SQSTM1Q13501 440 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 RASIP1Q5U651 963 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 NXPE3Q969Y0 559 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 LRRC3Q9BY71 257 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 TNKS2Q9H2K2 1166 aa8.11□□□□□ -1.11
KARS-208ENST00000566772 EIF4G1Q04637 1599 aaKnown RBP8.1□□□□□ -1.11
KARS-208ENST00000566772 FAM221AA4D161 298 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 NFKBIEO00221 500 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 EFSO43281 561 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 TRIM37O94972 964 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 RASGRF1Q13972 1273 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 PLEKHG6Q3KR16 790 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 KIAA0907Q7Z7F0 614 aaPredicted RBP8.1□□□□□ -1.11
KARS-208ENST00000566772 GATAD2BQ8WXI9 593 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 PNMA5Q96PV4 448 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 ZNF576Q9H609 170 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 BRMS1Q9HCU9 246 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 GPN3Q9UHW5 284 aaPredicted RBP8.1□□□□□ -1.11
KARS-208ENST00000566772 MAPK8IP1Q9UQF2 711 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 DYRK1BQ9Y463 629 aa8.1□□□□□ -1.11
KARS-208ENST00000566772 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.1□□□□□ -1.11
KARS-208ENST00000566772 ATXN7O15265 892 aaPredicted RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 SOX18P35713 384 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 ZNF165P49910 485 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 CLCQ05315 142 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 CCDC84Q86UT8 332 aaPredicted RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 ASAP3Q8TDY4 903 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 STAG1Q8WVM7 1258 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 NSUN5Q96P11 429 aaKnown RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 BHLHE41Q9C0J9 482 aaPredicted RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 MIR1-1HGQ9H1L0 117 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 TMEM260Q9NX78 707 aa8.09□□□□□ -1.11
KARS-208ENST00000566772 DDX56Q9NY93 547 aaKnown RBP8.09□□□□□ -1.11
KARS-208ENST00000566772 DCDC2BA2VCK2 349 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 KHNYNO15037 678 aaKnown RBP8.08□□□□□ -1.12
KARS-208ENST00000566772 FAM157BP0CG42 384 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 LMNB1P20700 586 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 PLAURQ03405 335 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 MPP2Q14168 576 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 CWF19L2Q2TBE0 894 aaKnown RBP8.08□□□□□ -1.12
KARS-208ENST00000566772 ARSHQ5FYA8 562 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 RPS26P11Q5JNZ5 115 aaPredicted RBP8.08□□□□□ -1.12
KARS-208ENST00000566772 EFHC2Q5JST6 749 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 LARP1BQ659C4 914 aaKnown RBP8.08□□□□□ -1.12
KARS-208ENST00000566772 GK5Q6ZS86 529 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 C16orf86Q6ZW13 317 aa8.08□□□□□ -1.12
KARS-208ENST00000566772 TMEM102Q8N9M5 508 aaPredicted RBP8.08□□□□□ -1.12
KARS-208ENST00000566772 PPME1Q9Y570 386 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms