RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 VWA5B2Q8N398 1253 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 CITED4Q96RK1 184 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 FAM129BQ96TA1 746 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 GGNBP2Q9H3C7 697 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 STRN4Q9NRL3 753 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 NDFIP2Q9NV92 336 aa7.55□□□□□ -1.2
CFDP1-204ENST00000564793 AHDC1Q5TGY3 1603 aaPredicted RBP7.54□□□□□ -1.2
CFDP1-204ENST00000564793 GPR182O15218 404 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 IDI1Q13907 227 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 NPAS4Q8IUM7 802 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 HCN2Q9UL51 889 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 KCNH4Q9UQ05 1017 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 KCNMB2Q9Y691 235 aa7.54□□□□□ -1.2
CFDP1-204ENST00000564793 PRAG1Q86YV5 1406 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 UBAP1LF5GYI3 381 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 IGHA2P01877 340 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 PDE3BQ13370 1112 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 GRIN2CQ14957 1233 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 ZNF787Q6DD87 383 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 TTC16Q8NEE8 873 aa7.53□□□□□ -1.2
CFDP1-204ENST00000564793 ASXL1Q8IXJ9 1541 aa7.52□□□□□ -1.2
CFDP1-204ENST00000564793 NUP155O75694 1391 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 XYLBO75191 536 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 RPLP1P05386 114 aaKnown RBP7.52□□□□□ -1.21
CFDP1-204ENST00000564793 ERCC3P19447 782 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 CD33P20138 364 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 KCNQ4P56696 695 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 SV2AQ7L0J3 742 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 DMRTB1Q96MA1 342 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 SLC52A1Q9NWF4 448 aa7.52□□□□□ -1.21
CFDP1-204ENST00000564793 NXF1Q9UBU9 619 aaKnown RBP7.52□□□□□ -1.21
CFDP1-204ENST00000564793 ATXN7L1Q9ULK2 861 aaPredicted RBP7.52□□□□□ -1.21
CFDP1-204ENST00000564793 TMEM94Q12767 1356 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 TREHO43280 583 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 FGFR3P22607 806 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 LAMC2Q13753 1193 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
CFDP1-204ENST00000564793 TRERF1Q96PN7 1200 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 NIF3L1Q9GZT8 377 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 MARK1Q9P0L2 795 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 PHF24Q9UPV7 400 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 FNDC3AQ9Y2H6 1198 aaKnown RBP7.51□□□□□ -1.21
CFDP1-204ENST00000564793 PTPRUQ92729 1446 aa7.51□□□□□ -1.21
CFDP1-204ENST00000564793 DISP3Q9P2K9 1392 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 H3BM21 787 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 EHHADHQ08426 723 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 FOXR1Q6PIV2 292 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 KRT25Q7Z3Z0 450 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 ZNF438Q7Z4V0 828 aa7.5□□□□□ -1.21
CFDP1-204ENST00000564793 PIK3R4Q99570 1358 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 P4HBP07237 508 aaKnown RBP7.49□□□□□ -1.21
CFDP1-204ENST00000564793 HSPA1LP34931 641 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
CFDP1-204ENST00000564793 SPEM2Q0P670 501 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 DSC3Q14574 896 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 PDE12Q6L8Q7 609 aaKnown RBP7.49□□□□□ -1.21
CFDP1-204ENST00000564793 RAB44Q7Z6P3 723 aaPredicted RBP7.49□□□□□ -1.21
CFDP1-204ENST00000564793 SLC30A3Q99726 388 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 CFHR5Q9BXR6 569 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 DCCP43146 1447 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 FAM135BQ49AJ0 1406 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 CDC42BPGQ6DT37 1551 aa7.49□□□□□ -1.21
CFDP1-204ENST00000564793 SASH3O75995 380 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 EGFRP00533 1210 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 MAPK8P45983 427 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 CTBSQ01459 385 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 ORC1Q13415 861 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 PTCH1Q13635 1447 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 CCINQ13939 588 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 ALKBH8Q96BT7 664 aaKnown RBP7.48□□□□□ -1.21
CFDP1-204ENST00000564793 GSX2Q9BZM3 304 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 ELP3Q9H9T3 547 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 TMEM63CQ9P1W3 806 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 FOXD3Q9UJU5 478 aaPredicted RBP7.48□□□□□ -1.21
CFDP1-204ENST00000564793 EID1Q9Y6B2 187 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 NCOA3Q9Y6Q9 1424 aa7.48□□□□□ -1.21
CFDP1-204ENST00000564793 FMN2Q9NZ56 1722 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 MARF1Q9Y4F3 1742 aaKnown RBP7.47□□□□□ -1.21
CFDP1-204ENST00000564793 SPATA31E1Q6ZUB1 1445 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 NFKB1P19838 968 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 PLCB3Q01970 1234 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 GAS6Q14393 721 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 XKR5Q6UX68 686 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 ILDR2Q71H61 639 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 NLRP13Q86W25 1043 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 NPAS3Q8IXF0 933 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 GPR161Q8N6U8 529 aaKnown RBP7.47□□□□□ -1.21
CFDP1-204ENST00000564793 BCL2L13Q9BXK5 485 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 C11orf16Q9NQ32 467 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 ABCA3Q99758 1704 aa7.47□□□□□ -1.21
CFDP1-204ENST00000564793 ADGRL3Q9HAR2 1447 aa7.46□□□□□ -1.21
CFDP1-204ENST00000564793 COL22A1Q8NFW1 1626 aaPredicted RBP7.46□□□□□ -1.21
CFDP1-204ENST00000564793 TERTO14746 1132 aaKnown RBP7.46□□□□□ -1.22
CFDP1-204ENST00000564793 TOM1O60784 492 aa7.46□□□□□ -1.22
CFDP1-204ENST00000564793 TNFRSF21O75509 655 aa7.46□□□□□ -1.22
CFDP1-204ENST00000564793 RARAP10276 462 aa7.46□□□□□ -1.22
CFDP1-204ENST00000564793 KCNA6P17658 529 aa7.46□□□□□ -1.22
CFDP1-204ENST00000564793 TARSP26639 723 aaKnown RBP7.46□□□□□ -1.22
CFDP1-204ENST00000564793 COL19A1Q14993 1142 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms