RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 PSMA5P28066 241 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 KCNJ4P48050 445 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 NMIQ13287 307 aaPredicted RBP13.88□□□□□ -0.19
PCAT1-202ENST00000561978 NECTIN1Q15223 517 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 KLHL40Q2TBA0 621 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 STYK1Q6J9G0 422 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 OLFM4Q6UX06 510 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 TTC14Q96N46 770 aa13.88□□□□□ -0.19
PCAT1-202ENST00000561978 DBNLQ9UJU6 430 aaKnown RBP13.88□□□□□ -0.19
PCAT1-202ENST00000561978 CIAO1O76071 339 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 PTH1RQ03431 593 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 VPS53Q5VIR6 699 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 RASEFQ8IZ41 740 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 CNKSR1Q969H4 720 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 ZSCAN31Q96LW9 406 aaPredicted RBP13.87□□□□□ -0.19
PCAT1-202ENST00000561978 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.87□□□□□ -0.19
PCAT1-202ENST00000561978 CYP46A1Q9Y6A2 500 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 C21orf2O43822 256 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 MRE11P49959 708 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 SF3B3Q15393 1217 aaKnown RBP13.87□□□□□ -0.19
PCAT1-202ENST00000561978 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 RBM17Q96I25 401 aaKnown RBP13.87□□□□□ -0.19
PCAT1-202ENST00000561978 HAUS7Q99871 368 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 ZSWIM6Q9HCJ5 1215 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 SEC31BQ9NQW1 1179 aa13.87□□□□□ -0.19
PCAT1-202ENST00000561978 DDX49Q9Y6V7 483 aaKnown RBP13.87□□□□□ -0.19
PCAT1-202ENST00000561978 COL4A1P02462 1669 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 BRD1O95696 1058 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 CASTP20810 708 aaKnown RBP13.86□□□□□ -0.19
PCAT1-202ENST00000561978 CDK11BP21127 795 aaKnown RBP13.86□□□□□ -0.19
PCAT1-202ENST00000561978 ALDH1B1P30837 517 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 HOXA10P31260 410 aaPredicted RBP13.86□□□□□ -0.19
PCAT1-202ENST00000561978 CTSWP56202 376 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 DDX46Q7L014 1031 aaKnown RBP13.86□□□□□ -0.19
PCAT1-202ENST00000561978 TTLL11Q8NHH1 800 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 FAM227BQ96M60 508 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
PCAT1-202ENST00000561978 EYA2O00167 538 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 HSP90B1P14625 803 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 AK2P54819 239 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 PKP1Q13835 747 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 CELF1Q92879 486 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 GREM2Q9H772 168 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 SH2B1Q9NRF2 756 aaPredicted RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 PDRG1Q9NUG6 133 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 HMG20BQ9P0W2 317 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 RBM8AQ9Y5S9 174 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 CCDC57Q2TAC2 916 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 NOL8Q76FK4 1167 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 RUFY3Q7L099 469 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 JAKMIP1Q96N16 626 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
PCAT1-202ENST00000561978 WDR33Q9C0J8 1336 aaKnown RBP13.85□□□□□ -0.19
PCAT1-202ENST00000561978 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
PCAT1-202ENST00000561978 DBNDD2Q9BQY9 259 aa13.84□□□□□ -0.19
PCAT1-202ENST00000561978 LMBRD1Q9NUN5 540 aa13.84□□□□□ -0.19
PCAT1-202ENST00000561978 MED23Q9ULK4 1368 aa13.84□□□□□ -0.19
PCAT1-202ENST00000561978 ANKRD1Q15327 319 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 TSGA10IPQ3SY00 556 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 ZMYND15Q9H091 742 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 AKAP2Q9Y2D5 859 aa13.83□□□□□ -0.19
PCAT1-202ENST00000561978 A0A0D9SFI3 127 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
PCAT1-202ENST00000561978 GRIN3BO60391 1043 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 GRAPQ13588 217 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 KRT32Q14532 448 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 GRAPLQ8TC17 118 aaPredicted RBP13.83□□□□□ -0.2
PCAT1-202ENST00000561978 C7orf43Q8WVR3 580 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 ALDH8A1Q9H2A2 487 aaPredicted RBP13.83□□□□□ -0.2
PCAT1-202ENST00000561978 CEP126Q9P2H0 1117 aa13.83□□□□□ -0.2
PCAT1-202ENST00000561978 SLC27A2O14975 620 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 ITGA6P23229 1130 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 MCMDC2Q4G0Z9 681 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 KBTBD3Q8NAB2 608 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.82□□□□□ -0.2
PCAT1-202ENST00000561978 TAF5LO75529 589 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 CSF1RP07333 972 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 LRRFIP1Q32MZ4 808 aaKnown RBP13.82□□□□□ -0.2
PCAT1-202ENST00000561978 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
PCAT1-202ENST00000561978 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
PCAT1-202ENST00000561978 SPEF2Q9C093 1822 aa13.81□□□□□ -0.2
PCAT1-202ENST00000561978 PRPF40AO75400 957 aaKnown RBP13.81□□□□□ -0.2
PCAT1-202ENST00000561978 XRCC6P12956 609 aaKnown RBP eCLIP13.81□□□□□ -0.2
PCAT1-202ENST00000561978 RPS8P62241 208 aaKnown RBP13.81□□□□□ -0.2
PCAT1-202ENST00000561978 RASSF7Q02833 373 aa13.81□□□□□ -0.2
PCAT1-202ENST00000561978 ADCK5Q3MIX3 580 aa13.81□□□□□ -0.2
PCAT1-202ENST00000561978 HELLSQ9NRZ9 838 aa13.81□□□□□ -0.2
PCAT1-202ENST00000561978 BBOX1O75936 387 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 MBD3O95983 291 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 TIMM10P62072 90 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 IFIT5Q13325 482 aaKnown RBP13.8□□□□□ -0.2
PCAT1-202ENST00000561978 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
PCAT1-202ENST00000561978 GRPEL1Q9HAV7 217 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms