RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 SRGAP3O43295 1099 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 LARP1BQ659C4 914 aaKnown RBP21.55■■□□□ 1.04
RAB40C-206ENST00000561781 SULT6B1Q6IMI4 303 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 FAM212AQ96EL1 285 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 SPATA32Q96LK8 384 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 GNAI2P04899 355 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 ERC1Q8IUD2 1116 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 MICALL1Q8N3F8 863 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 CRB1P82279 1406 aa21.55■■□□□ 1.04
RAB40C-206ENST00000561781 BECN2A8MW95 431 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 F6X3S4 739 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 URI1O94763 535 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-206ENST00000561781 SGSM3Q96HU1 749 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 TFIP11Q9UBB9 837 aaKnown RBP21.54■■□□□ 1.04
RAB40C-206ENST00000561781 A0A0G2JS52 829 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 PNMA6EA0A0J9YXQ4 647 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 CCDC151A5D8V7 595 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 LONRF2Q1L5Z9 754 aa21.54■■□□□ 1.04
RAB40C-206ENST00000561781 C11orf57Q6ZUT1 292 aaPredicted RBP21.54■■□□□ 1.04
RAB40C-206ENST00000561781 SPATA31A1Q5TZJ5 1347 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 EIF3JO75822 258 aaKnown RBP21.53■■□□□ 1.04
RAB40C-206ENST00000561781 SLC4A2P04920 1241 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 APOBRQ0VD83 1088 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 NECAB1Q8N987 351 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 SH2B1Q9NRF2 756 aaPredicted RBP21.53■■□□□ 1.04
RAB40C-206ENST00000561781 SPATA31A5Q5VU36 1347 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 SPATA31A7Q8IWB4 1347 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 PPFIA4O75335 1185 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 GNAI3P08754 354 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 BRD3Q15059 726 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 VPS72Q15906 364 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 ME3Q16798 604 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 RABGGTAQ92696 567 aa21.53■■□□□ 1.04
RAB40C-206ENST00000561781 LRRC31Q6UY01 552 aa21.52■■□□□ 1.04
RAB40C-206ENST00000561781 LEO1Q8WVC0 666 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-206ENST00000561781 ZSCAN31Q96LW9 406 aaPredicted RBP21.52■■□□□ 1.04
RAB40C-206ENST00000561781 ABCC6O95255 1503 aa21.52■■□□□ 1.04
RAB40C-206ENST00000561781 ATRNO75882 1429 aa21.52■■□□□ 1.04
RAB40C-206ENST00000561781 GLI3P10071 1580 aa21.52■■□□□ 1.03
RAB40C-206ENST00000561781 STX1AQ16623 288 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 VPS53Q5VIR6 699 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 TMED8Q6PL24 325 aaPredicted RBP21.51■■□□□ 1.03
RAB40C-206ENST00000561781 BICD2Q8TD16 824 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 GJD4Q96KN9 370 aaPredicted RBP21.51■■□□□ 1.03
RAB40C-206ENST00000561781 PARD6BQ9BYG5 372 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 TRPC5Q9UL62 973 aaPredicted RBP21.51■■□□□ 1.03
RAB40C-206ENST00000561781 IGSF1Q8N6C5 1336 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 ERLIN2O94905 339 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 CCDC30Q5VVM6 783 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 NBPF11Q86T75 865 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 TBC1D22AQ8WUA7 517 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 STAG1Q8WVM7 1258 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 MEGF6O75095 1541 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 AOX1Q06278 1338 aa21.51■■□□□ 1.03
RAB40C-206ENST00000561781 C21orf2O43822 256 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 SFPQP23246 707 aaKnown RBP eCLIP21.5■■□□□ 1.03
RAB40C-206ENST00000561781 GNL2Q13823 731 aaKnown RBP21.5■■□□□ 1.03
RAB40C-206ENST00000561781 ADCK5Q3MIX3 580 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 SPG7Q9UQ90 795 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 PARP3Q9Y6F1 533 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 CCT4P50991 539 aaKnown RBP21.5■■□□□ 1.03
RAB40C-206ENST00000561781 PPP2R5AQ15172 486 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 PGBD1Q96JS3 809 aa21.5■■□□□ 1.03
RAB40C-206ENST00000561781 ZNF772Q68DY9 489 aaPredicted RBP21.49■■□□□ 1.03
RAB40C-206ENST00000561781 RSRC2Q7L4I2 434 aaKnown RBP21.49■■□□□ 1.03
RAB40C-206ENST00000561781 JAKMIP1Q96N16 626 aaKnown RBP21.49■■□□□ 1.03
RAB40C-206ENST00000561781 IL1RAPL2Q9NP60 686 aa21.49■■□□□ 1.03
RAB40C-206ENST00000561781 FAM208AQ9UK61 1670 aaKnown RBP21.49■■□□□ 1.03
RAB40C-206ENST00000561781 FAM182BQ5T319 152 aa21.49■■□□□ 1.03
RAB40C-206ENST00000561781 NUTM1Q86Y26 1132 aa21.49■■□□□ 1.03
RAB40C-206ENST00000561781 PDE11AQ9HCR9 933 aa21.49■■□□□ 1.03
RAB40C-206ENST00000561781 A1CFQ9NQ94 594 aaKnown RBP21.49■■□□□ 1.03
RAB40C-206ENST00000561781 SETQ01105 290 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-206ENST00000561781 G2E3Q7L622 706 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 HDXQ7Z353 690 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 HOMEZQ8IX15 550 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 HNRNPLLQ8WVV9 542 aaKnown RBP21.48■■□□□ 1.03
RAB40C-206ENST00000561781 RGPD1P0DJD0 1748 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 HNRNPH1P31943 449 aaKnown RBP21.48■■□□□ 1.03
RAB40C-206ENST00000561781 TRIM65Q6PJ69 517 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 CWC27Q6UX04 472 aaKnown RBP21.48■■□□□ 1.03
RAB40C-206ENST00000561781 JMYQ8N9B5 988 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 EPC1Q9H2F5 836 aa21.48■■□□□ 1.03
RAB40C-206ENST00000561781 ANKRD65E5RJM6 399 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 CTAGE5O15320 804 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 MAP9Q49MG5 647 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 MPHOSPH8Q99549 860 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 AKAP2Q9Y2D5 859 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.47■■□□□ 1.03
RAB40C-206ENST00000561781 C11orf91Q3C1V1 193 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 GIMAP7Q8NHV1 300 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 CYP46A1Q9Y6A2 500 aa21.47■■□□□ 1.03
RAB40C-206ENST00000561781 CHL1O00533 1208 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 ATP8B2P98198 1209 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 TTLL5Q6EMB2 1281 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 DHX40Q8IX18 779 aaKnown RBP21.46■■□□□ 1.03
RAB40C-206ENST00000561781 GOLGA1Q92805 767 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 IRF6O14896 467 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 TXLNAP40222 546 aa21.46■■□□□ 1.03
RAB40C-206ENST00000561781 DDX54Q8TDD1 881 aaKnown RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms