RNA–Protein interactions for RNA: ENST00000561003.5

CSHL1-210, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 2 BASIC

Gene CSHL1, Length 880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-210ENST00000561003 RBM5P52756 815 aaKnown RBP eCLIP13.1□□□□□ -0.31
CSHL1-210ENST00000561003 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
CSHL1-210ENST00000561003 LDHAL6AQ6ZMR3 332 aa13.1□□□□□ -0.31
CSHL1-210ENST00000561003 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
CSHL1-210ENST00000561003 PAPPA2Q9BXP8 1791 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 SPDYE2BA6NHP3 402 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 SPDYE6P0CI01 402 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 CASP7P55210 303 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 CFAP100Q494V2 611 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 G2E3Q7L622 706 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 NBPF11Q86T75 865 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 WNK4Q96J92 1243 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 LAMB2P55268 1798 aa13.09□□□□□ -0.31
CSHL1-210ENST00000561003 COL1A1P02452 1464 aaPredicted RBP13.09□□□□□ -0.31
CSHL1-210ENST00000561003 TAF5LO75529 589 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 USP2O75604 605 aaPredicted RBP13.08□□□□□ -0.32
CSHL1-210ENST00000561003 TNNI2P48788 182 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 SP3Q02447 781 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 RASA3Q14644 834 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 PRMT6Q96LA8 375 aaPredicted RBP13.08□□□□□ -0.32
CSHL1-210ENST00000561003 TMEM106CQ9BVX2 250 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 EFCC1Q9HA90 598 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 VEZTQ9HBM0 779 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 CNNM1Q9NRU3 951 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 TAF1P21675 1872 aa13.08□□□□□ -0.32
CSHL1-210ENST00000561003 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
CSHL1-210ENST00000561003 PDE4DIPQ5VU43 2346 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 TESPA1A2RU30 521 aaPredicted RBP13.07□□□□□ -0.32
CSHL1-210ENST00000561003 F8W031 263 aaPredicted RBP13.07□□□□□ -0.32
CSHL1-210ENST00000561003 UBE4AQ14139 1066 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 OTOP1Q7RTM1 612 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 HELBQ8NG08 1087 aaPredicted RBP13.07□□□□□ -0.32
CSHL1-210ENST00000561003 HOOK2Q96ED9 719 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 R3HDMLQ9H3Y0 253 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 C9orf78Q9NZ63 289 aaPredicted RBP13.07□□□□□ -0.32
CSHL1-210ENST00000561003 SERPINA10Q9UK55 444 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
CSHL1-210ENST00000561003 POLR2AP24928 1970 aaKnown RBP13.07□□□□□ -0.32
CSHL1-210ENST00000561003 VAMP4O75379 141 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 KLRK1P26718 216 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 HIBADHP31937 336 aaKnown RBP13.06□□□□□ -0.32
CSHL1-210ENST00000561003 FOXO4P98177 505 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 NBPF12Q5TAG4 269 aaPredicted RBP13.06□□□□□ -0.32
CSHL1-210ENST00000561003 LMBR1LQ6UX01 489 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 CERS5Q8N5B7 392 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.06□□□□□ -0.32
CSHL1-210ENST00000561003 TNRC18O15417 2968 aaPredicted RBP13.06□□□□□ -0.32
CSHL1-210ENST00000561003 FAM205AQ6ZU69 1335 aa13.06□□□□□ -0.32
CSHL1-210ENST00000561003 CLRN2A0PK11 232 aa13.05□□□□□ -0.32
CSHL1-210ENST00000561003 PLIN1O60240 522 aa13.05□□□□□ -0.32
CSHL1-210ENST00000561003 GTF2A2P52657 109 aa13.05□□□□□ -0.32
CSHL1-210ENST00000561003 ZFYVE28Q9HCC9 887 aa13.05□□□□□ -0.32
CSHL1-210ENST00000561003 AKAP11Q9UKA4 1901 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 GRM8O00222 908 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 IGF2BP3O00425 579 aaKnown RBP eCLIP13.04□□□□□ -0.32
CSHL1-210ENST00000561003 ALDH1L1O75891 902 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 MAP3K9P80192 1104 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 HDLBPQ00341 1268 aaKnown RBP13.04□□□□□ -0.32
CSHL1-210ENST00000561003 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 BEND3Q5T5X7 828 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 VPS37DQ86XT2 251 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 TDRD7Q8NHU6 1098 aaKnown RBP13.04□□□□□ -0.32
CSHL1-210ENST00000561003 TBC1D22AQ8WUA7 517 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 CLMNQ96JQ2 1002 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 MRIQ9BWK5 157 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 TTF2Q9UNY4 1162 aaKnown RBP13.04□□□□□ -0.32
CSHL1-210ENST00000561003 CSADQ9Y600 493 aa13.04□□□□□ -0.32
CSHL1-210ENST00000561003 SCN9AQ15858 1988 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 SNAP23O00161 211 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 GNRH1P01148 92 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 CRHR2Q13324 411 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 KIF22Q14807 665 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 CAVIN4Q5BKX8 364 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 DZIP1LQ8IYY4 767 aaKnown RBP13.03□□□□□ -0.32
CSHL1-210ENST00000561003 OPTNQ96CV9 577 aa13.03□□□□□ -0.32
CSHL1-210ENST00000561003 ZNF70Q9UC06 446 aaPredicted RBP13.03□□□□□ -0.32
CSHL1-210ENST00000561003 COL4A1P02462 1669 aa13.02□□□□□ -0.32
CSHL1-210ENST00000561003 FRAT2O75474 233 aaPredicted RBP13.02□□□□□ -0.33
CSHL1-210ENST00000561003 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.33
CSHL1-210ENST00000561003 CD99L2Q8TCZ2 262 aa13.02□□□□□ -0.33
CSHL1-210ENST00000561003 ZCCHC17Q9NP64 241 aaKnown RBP13.02□□□□□ -0.33
CSHL1-210ENST00000561003 FZD1Q9UP38 647 aa13.02□□□□□ -0.33
CSHL1-210ENST00000561003 IRS2Q9Y4H2 1338 aa13.02□□□□□ -0.33
CSHL1-210ENST00000561003 PRMT2P55345 433 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 EXOSC9Q06265 439 aaKnown RBP13.01□□□□□ -0.33
CSHL1-210ENST00000561003 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 FAM84BQ96KN1 310 aaPredicted RBP13.01□□□□□ -0.33
CSHL1-210ENST00000561003 PTPN18Q99952 460 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 SRCIN1Q9C0H9 1055 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 TDRD3Q9H7E2 651 aaKnown RBP13.01□□□□□ -0.33
CSHL1-210ENST00000561003 ELP3Q9H9T3 547 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 TMOD2Q9NZR1 351 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 SUGT1Q9Y2Z0 365 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 MROH5Q6ZUA9 1318 aa13.01□□□□□ -0.33
CSHL1-210ENST00000561003 CCL15-CCL14A0A0B4J2E2 113 aa13□□□□□ -0.33
CSHL1-210ENST00000561003 CETPP11597 493 aa13□□□□□ -0.33
CSHL1-210ENST00000561003 CRKP46108 304 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms