RNA–Protein interactions for RNA: ENST00000560734.5

SHF-208, Transcript of Src homology 2 domain containing F, humanhuman

TSL 3 BASIC

Gene SHF, Length 1,731 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-208ENST00000560734 ZNF804BA4D1E1 1349 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 TCRBV5S4A2TA0A5A2 114 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 PDE6AP16499 860 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 RASGRF1Q13972 1273 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 SLC27A3Q5K4L6 730 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 Q6ZUG5 572 aa29.75■■■□□ 2.35
SHF-208ENST00000560734 SRP68Q9UHB9 627 aaKnown RBP29.75■■■□□ 2.35
SHF-208ENST00000560734 ZMYM6O95789 1325 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 GOLGA6L3A6NEY3 463 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 C4AP0C0L4 1744 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 WDR19Q8NEZ3 1342 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 FGAP02671 866 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 COL9A3Q14050 684 aaPredicted RBP29.74■■■□□ 2.35
SHF-208ENST00000560734 C3orf67Q6ZVT6 689 aa29.74■■■□□ 2.35
SHF-208ENST00000560734 LAMA4Q16363 1823 aa29.73■■■□□ 2.35
SHF-208ENST00000560734 IDH1O75874 414 aaKnown RBP29.73■■■□□ 2.35
SHF-208ENST00000560734 RFC4P35249 363 aa29.73■■■□□ 2.35
SHF-208ENST00000560734 ALX1Q15699 326 aa29.73■■■□□ 2.35
SHF-208ENST00000560734 BICDL1Q6ZP65 573 aa29.73■■■□□ 2.35
SHF-208ENST00000560734 GTF3C6Q969F1 213 aa29.73■■■□□ 2.35
SHF-208ENST00000560734 LLPHQ9BRT6 129 aaKnown RBP29.73■■■□□ 2.35
SHF-208ENST00000560734 GNL3LQ9NVN8 582 aaKnown RBP29.73■■■□□ 2.35
SHF-208ENST00000560734 ZNF532Q9HCE3 1301 aa29.72■■■□□ 2.35
SHF-208ENST00000560734 MBD3O95983 291 aa29.71■■■□□ 2.35
SHF-208ENST00000560734 NECAB1Q8N987 351 aa29.71■■■□□ 2.35
SHF-208ENST00000560734 TMEM87AQ8NBN3 555 aa29.71■■■□□ 2.35
SHF-208ENST00000560734 MINPP1Q9UNW1 487 aa29.71■■■□□ 2.35
SHF-208ENST00000560734 TCEANC2Q96MN5 208 aa29.71■■■□□ 2.35
SHF-208ENST00000560734 CARMIL3Q8ND23 1372 aa29.7■■■□□ 2.35
SHF-208ENST00000560734 PFKFB2O60825 505 aa29.7■■■□□ 2.34
SHF-208ENST00000560734 PRPF40AO75400 957 aaKnown RBP29.7■■■□□ 2.34
SHF-208ENST00000560734 F13A1P00488 732 aa29.7■■■□□ 2.34
SHF-208ENST00000560734 EVCP57679 992 aa29.7■■■□□ 2.34
SHF-208ENST00000560734 RPS8P62241 208 aaKnown RBP29.7■■■□□ 2.34
SHF-208ENST00000560734 ANKRD2Q9GZV1 360 aa29.7■■■□□ 2.34
SHF-208ENST00000560734 GZF1Q9H116 711 aaPredicted RBP29.7■■■□□ 2.34
SHF-208ENST00000560734 BCAMP50895 628 aa29.69■■■□□ 2.34
SHF-208ENST00000560734 MTMR6Q9Y217 621 aa29.69■■■□□ 2.34
SHF-208ENST00000560734 COL4A1P02462 1669 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 SEMA3EO15041 775 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 ZNF274Q96GC6 653 aaPredicted RBP29.68■■■□□ 2.34
SHF-208ENST00000560734 PDS5AQ29RF7 1337 aaKnown RBP29.68■■■□□ 2.34
SHF-208ENST00000560734 ZNF213O14771 459 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 FGD1P98174 961 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 TTLL5Q6EMB2 1281 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 STRBPQ96SI9 672 aaKnown RBP29.68■■■□□ 2.34
SHF-208ENST00000560734 WWC3Q9ULE0 1092 aa29.68■■■□□ 2.34
SHF-208ENST00000560734 CAVIN4Q5BKX8 364 aa29.67■■■□□ 2.34
SHF-208ENST00000560734 KRT27Q7Z3Y8 459 aa29.67■■■□□ 2.34
SHF-208ENST00000560734 BRF1Q92994 677 aa29.67■■■□□ 2.34
SHF-208ENST00000560734 GNAT2P19087 354 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 RXRBP28702 533 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 MRE11P49959 708 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 TMED8Q6PL24 325 aaPredicted RBP29.66■■■□□ 2.34
SHF-208ENST00000560734 AMIGO3Q86WK7 504 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 CELF1Q92879 486 aaKnown RBP29.66■■■□□ 2.34
SHF-208ENST00000560734 LRRC4BQ9NT99 713 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 PNPLA7Q6ZV29 1317 aa29.66■■■□□ 2.34
SHF-208ENST00000560734 FOXD4L5Q5VV16 416 aaPredicted RBP29.65■■■□□ 2.34
SHF-208ENST00000560734 LARP1BQ659C4 914 aaKnown RBP29.65■■■□□ 2.34
SHF-208ENST00000560734 NCOA7Q8NI08 942 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 FOXD4L4Q8WXT5 416 aaPredicted RBP29.65■■■□□ 2.34
SHF-208ENST00000560734 AIDAQ96BJ3 306 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 BRPF3Q9ULD4 1205 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 SNAP23O00161 211 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 IGSF3O75054 1194 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 MCM5P33992 734 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 SMIM5Q71RC9 77 aa29.65■■■□□ 2.34
SHF-208ENST00000560734 PATL2C9JE40 543 aaKnown RBP29.64■■■□□ 2.34
SHF-208ENST00000560734 CSPP1Q1MSJ5 1256 aa29.64■■■□□ 2.34
SHF-208ENST00000560734 DENND2AQ9ULE3 1009 aa29.64■■■□□ 2.34
SHF-208ENST00000560734 UBR3Q6ZT12 1888 aa29.64■■■□□ 2.34
SHF-208ENST00000560734 MYO5AQ9Y4I1 1855 aaKnown RBP29.64■■■□□ 2.34
SHF-208ENST00000560734 TM4SF1P30408 202 aa29.63■■■□□ 2.33
SHF-208ENST00000560734 MB21D2Q8IYB1 491 aaPredicted RBP29.63■■■□□ 2.33
SHF-208ENST00000560734 MAGEB6Q8N7X4 407 aa29.63■■■□□ 2.33
SHF-208ENST00000560734 SMARCC2Q8TAQ2 1214 aa29.63■■■□□ 2.33
SHF-208ENST00000560734 FBXO33Q7Z6M2 555 aa29.62■■■□□ 2.33
SHF-208ENST00000560734 A0A0G2JLW4 131 aa29.62■■■□□ 2.33
SHF-208ENST00000560734 HMGN5P82970 282 aaKnown RBP29.62■■■□□ 2.33
SHF-208ENST00000560734 NFIXQ14938 502 aa29.62■■■□□ 2.33
SHF-208ENST00000560734 KIF3AQ9Y496 699 aa29.62■■■□□ 2.33
SHF-208ENST00000560734 ZNF445P59923 1031 aa29.61■■■□□ 2.33
SHF-208ENST00000560734 RALYLQ86SE5 291 aaKnown RBP29.61■■■□□ 2.33
SHF-208ENST00000560734 GPT2Q8TD30 523 aa29.61■■■□□ 2.33
SHF-208ENST00000560734 NCLP19338 710 aaKnown RBP29.6■■■□□ 2.33
SHF-208ENST00000560734 SCRN1Q12765 414 aa29.59■■■□□ 2.33
SHF-208ENST00000560734 TRDNQ13061 729 aa29.59■■■□□ 2.33
SHF-208ENST00000560734 FAM84BQ96KN1 310 aaPredicted RBP29.59■■■□□ 2.33
SHF-208ENST00000560734 LRP2BPQ9P2M1 347 aa29.59■■■□□ 2.33
SHF-208ENST00000560734 BRWD3Q6RI45 1802 aa29.59■■■□□ 2.33
SHF-208ENST00000560734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.59■■■□□ 2.33
SHF-208ENST00000560734 XRCC6P12956 609 aaKnown RBP eCLIP29.58■■■□□ 2.33
SHF-208ENST00000560734 STK3Q13188 491 aa29.58■■■□□ 2.33
SHF-208ENST00000560734 KLHL34Q8N239 644 aa29.58■■■□□ 2.33
SHF-208ENST00000560734 CNBD1Q8NA66 436 aa29.58■■■□□ 2.33
SHF-208ENST00000560734 PDIA3P30101 505 aaKnown RBP29.57■■■□□ 2.32
SHF-208ENST00000560734 RBM6P78332 1123 aaKnown RBP29.57■■■□□ 2.32
SHF-208ENST00000560734 NACAP1Q9BZK3 213 aa29.57■■■□□ 2.32
SHF-208ENST00000560734 PRC1O43663 620 aa29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 149.5 ms