RNA–Protein interactions for RNA: ENST00000560540.5

SHF-207, Transcript of Src homology 2 domain containing F, humanhuman

TSL 5 BASIC

Gene SHF, Length 2,062 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-207ENST00000560540 ATP6V1AP38606 617 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 LRMPQ12912 555 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 IQCB1Q15051 598 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 FAM196AQ6ZSG2 479 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 DDX11Q96FC9 970 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 TEX13AQ9BXU3 409 aaPredicted RBP28.81■■■□□ 2.2
SHF-207ENST00000560540 NRBP1Q9UHY1 535 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 CASP7P55210 303 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 KCNQ4P56696 695 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 FGD1P98174 961 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 ITPK1Q13572 414 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 STX1AQ16623 288 aa28.81■■■□□ 2.2
SHF-207ENST00000560540 SMTNL1A8MU46 457 aa28.8■■■□□ 2.2
SHF-207ENST00000560540 PDCL2Q8N4E4 241 aa28.8■■■□□ 2.2
SHF-207ENST00000560540 NDUFB9Q9Y6M9 179 aa28.8■■■□□ 2.2
SHF-207ENST00000560540 STARD3NLO95772 234 aa28.79■■■□□ 2.2
SHF-207ENST00000560540 DDX46Q7L014 1031 aaKnown RBP28.79■■■□□ 2.2
SHF-207ENST00000560540 MRFAP1L1Q96HT8 127 aa28.79■■■□□ 2.2
SHF-207ENST00000560540 NUP188Q5SRE5 1749 aa28.79■■■□□ 2.2
SHF-207ENST00000560540 GOLGA6L19H0YKK7 550 aa28.79■■■□□ 2.2
SHF-207ENST00000560540 PRDM4Q9UKN5 801 aa28.79■■■□□ 2.2
SHF-207ENST00000560540 SALL1Q9NSC2 1324 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 A0A087WZG4 1122 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 PTPDC1A2A3K4 754 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 PPP4R3BQ5MIZ7 849 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 CHMP4CQ96CF2 233 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 ZNF396Q96N95 335 aaPredicted RBP28.78■■■□□ 2.2
SHF-207ENST00000560540 GPR108Q9NPR9 543 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 FAM177BA6PVY3 158 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 NEMFO60524 1076 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 CTDNEP1O95476 244 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 CHGBP05060 677 aa28.78■■■□□ 2.2
SHF-207ENST00000560540 EXOSC10Q01780 885 aaKnown RBP28.78■■■□□ 2.2
SHF-207ENST00000560540 BCL11BQ9C0K0 894 aaPredicted RBP28.78■■■□□ 2.2
SHF-207ENST00000560540 TRIM37O94972 964 aa28.77■■■□□ 2.2
SHF-207ENST00000560540 CCAR1Q8IX12 1150 aaKnown RBP28.77■■■□□ 2.2
SHF-207ENST00000560540 PLBD2Q8NHP8 589 aa28.77■■■□□ 2.2
SHF-207ENST00000560540 CCDC73Q6ZRK6 1079 aa28.76■■■□□ 2.19
SHF-207ENST00000560540 CACTINQ8WUQ7 758 aaKnown RBP28.76■■■□□ 2.19
SHF-207ENST00000560540 LRRC2Q9BYS8 371 aa28.76■■■□□ 2.19
SHF-207ENST00000560540 PAXBP1Q9Y5B6 917 aa28.76■■■□□ 2.19
SHF-207ENST00000560540 ZBTB1Q9Y2K1 713 aa28.76■■■□□ 2.19
SHF-207ENST00000560540 C11orf57Q6ZUT1 292 aaPredicted RBP28.75■■■□□ 2.19
SHF-207ENST00000560540 C16orf45Q96MC5 204 aaPredicted RBP28.75■■■□□ 2.19
SHF-207ENST00000560540 PAG1Q9NWQ8 432 aa28.75■■■□□ 2.19
SHF-207ENST00000560540 ZNF330Q9Y3S2 320 aaPredicted RBP28.75■■■□□ 2.19
SHF-207ENST00000560540 ZMYM1Q5SVZ6 1142 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 TTLL7Q6ZT98 887 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 TNNT1P13805 278 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 FAM160A1Q05DH4 1040 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 SNW1Q13573 536 aaKnown RBP28.74■■■□□ 2.19
SHF-207ENST00000560540 CCDC144BQ3MJ40 725 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 CCDC144CPQ8IYA2 1237 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 GOLPH3LQ9H4A5 285 aa28.74■■■□□ 2.19
SHF-207ENST00000560540 APOBRQ0VD83 1088 aa28.73■■■□□ 2.19
SHF-207ENST00000560540 UTP14CQ5TAP6 766 aaKnown RBP28.73■■■□□ 2.19
SHF-207ENST00000560540 ENGASEQ8NFI3 743 aa28.73■■■□□ 2.19
SHF-207ENST00000560540 ZNF274Q96GC6 653 aaPredicted RBP28.73■■■□□ 2.19
SHF-207ENST00000560540 KINO60870 393 aaKnown RBP28.73■■■□□ 2.19
SHF-207ENST00000560540 LMBR1LQ6UX01 489 aa28.73■■■□□ 2.19
SHF-207ENST00000560540 USP28Q96RU2 1077 aa28.73■■■□□ 2.19
SHF-207ENST00000560540 ANO10Q9NW15 660 aa28.73■■■□□ 2.19
SHF-207ENST00000560540 ATP5J2-PTCD1G3V325 749 aa28.72■■■□□ 2.19
SHF-207ENST00000560540 FOXO4P98177 505 aa28.72■■■□□ 2.19
SHF-207ENST00000560540 DDX60Q8IY21 1712 aaKnown RBP28.72■■■□□ 2.19
SHF-207ENST00000560540 CEBPZQ03701 1054 aaKnown RBP28.71■■■□□ 2.19
SHF-207ENST00000560540 ATG9AQ7Z3C6 839 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 LRRC8AQ8IWT6 810 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 FBXL16Q8N461 479 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 E7EWF7 191 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 H7C1W4 665 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 GOLIM4O00461 696 aa28.71■■■□□ 2.19
SHF-207ENST00000560540 CRKLP46109 303 aaKnown RBP28.71■■■□□ 2.19
SHF-207ENST00000560540 INTS5Q6P9B9 1019 aaKnown RBP28.71■■■□□ 2.19
SHF-207ENST00000560540 NCBP1Q09161 790 aaKnown RBP28.7■■■□□ 2.19
SHF-207ENST00000560540 LINC00116Q8NCU8 138 aa28.7■■■□□ 2.19
SHF-207ENST00000560540 CICQ96RK0 1608 aaPredicted RBP28.7■■■□□ 2.18
SHF-207ENST00000560540 MYH14Q7Z406 1995 aaKnown RBP28.7■■■□□ 2.18
SHF-207ENST00000560540 DMTNQ08495 405 aa28.7■■■□□ 2.18
SHF-207ENST00000560540 ATP2B3Q16720 1220 aa28.7■■■□□ 2.18
SHF-207ENST00000560540 CARMIL3Q8ND23 1372 aa28.69■■■□□ 2.18
SHF-207ENST00000560540 HSPD1P10809 573 aaKnown RBP28.69■■■□□ 2.18
SHF-207ENST00000560540 IL15P40933 162 aaPredicted RBP28.69■■■□□ 2.18
SHF-207ENST00000560540 TPD52L1Q16890 204 aaPredicted RBP28.69■■■□□ 2.18
SHF-207ENST00000560540 FTOQ9C0B1 505 aaKnown RBP eCLIP28.69■■■□□ 2.18
SHF-207ENST00000560540 PDIA3P30101 505 aaKnown RBP28.68■■■□□ 2.18
SHF-207ENST00000560540 DHX40Q8IX18 779 aaKnown RBP28.68■■■□□ 2.18
SHF-207ENST00000560540 BECN2A8MW95 431 aa28.68■■■□□ 2.18
SHF-207ENST00000560540 ZSCAN20P17040 1043 aaPredicted RBP28.68■■■□□ 2.18
SHF-207ENST00000560540 CEP57L1Q8IYX8 460 aa28.68■■■□□ 2.18
SHF-207ENST00000560540 CCDC87Q9NVE4 849 aa28.68■■■□□ 2.18
SHF-207ENST00000560540 CCNL1Q9UK58 526 aaPredicted RBP28.68■■■□□ 2.18
SHF-207ENST00000560540 MAST3O60307 1309 aa28.68■■■□□ 2.18
SHF-207ENST00000560540 LY75O60449 1722 aa28.67■■■□□ 2.18
SHF-207ENST00000560540 COL5A3P25940 1745 aaPredicted RBP28.67■■■□□ 2.18
SHF-207ENST00000560540 ZNF831Q5JPB2 1677 aa28.67■■■□□ 2.18
SHF-207ENST00000560540 EVCP57679 992 aa28.67■■■□□ 2.18
SHF-207ENST00000560540 FSIP1Q8NA03 581 aa28.67■■■□□ 2.18
SHF-207ENST00000560540 CCDC112Q8NEF3 446 aa28.67■■■□□ 2.18
SHF-207ENST00000560540 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.67■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms