RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PNPLA7Q6ZV29 1317 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 GRAPQ13588 217 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 UBE4AQ14139 1066 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 TTF1Q15361 905 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 CAVIN4Q5BKX8 364 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 GRAPLQ8TC17 118 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 CHAMP1Q96JM3 812 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 PDGFDQ9GZP0 370 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 LRP2BPQ9P2M1 347 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 APPP05067 770 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 BLOC1S2Q6QNY1 142 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 OLFM4Q6UX06 510 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 MIGA1Q8NAN2 632 aa12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 TNPO1Q92973 898 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 NSFL1CQ9UNZ2 370 aaKnown RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 U3KPZ7 1027 aaPredicted RBP12.99□□□□□ -0.33
SNRPA1-211ENST00000560433 ARAP2Q8WZ64 1704 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 ZNF804BA4D1E1 1349 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 FGAP02671 866 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 ZFYP08048 801 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 MMP10P09238 476 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 CHAF1AQ13111 956 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 NECAB1Q8N987 351 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 A0A1B0GUL6 1792 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 COL1A1P02452 1464 aaPredicted RBP12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 MYH7P12883 1935 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 TCRBV5S4A2TA0A5A2 114 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 STK3Q13188 491 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 ADGRA1Q86SQ6 560 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 STK11IPQ8N1F8 1099 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 DSCC1Q9BVC3 393 aa12.98□□□□□ -0.33
SNRPA1-211ENST00000560433 RPAP1Q9BWH6 1393 aaPredicted RBP12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 LRRFIP1Q32MZ4 808 aaKnown RBP12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 CCDC83Q8IWF9 413 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 NEK1Q96PY6 1258 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 ARMT1Q9H993 441 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 DENND2AQ9ULE3 1009 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 TPCN1Q9ULQ1 816 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 PRKAB2O43741 272 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 RPS6KB1P23443 525 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 MCM2P49736 904 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 MAP3K12Q12852 859 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 ME3Q16798 604 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 AIDAQ96BJ3 306 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 LIMCH1Q9UPQ0 1083 aa12.97□□□□□ -0.33
SNRPA1-211ENST00000560433 PSMA5P28066 241 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 GPSM2P81274 684 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 RAB3GAP1Q15042 981 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 ZSCAN25Q6NSZ9 544 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 TM6SF1Q9BZW5 370 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 INCENPQ9NQS7 918 aa12.96□□□□□ -0.33
SNRPA1-211ENST00000560433 TNS1Q9HBL0 1735 aaKnown RBP12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 E7EWF7 191 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 MBD4O95243 580 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 HIBADHP31937 336 aaKnown RBP12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 CUL4AQ13619 759 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 TOB2Q14106 344 aaPredicted RBP12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 UBE3CQ15386 1083 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 FOXD4L6Q3SYB3 417 aaPredicted RBP12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 CRY2Q49AN0 593 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 FOXD4L3Q6VB84 417 aaPredicted RBP12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 NLGN1Q8N2Q7 840 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 NKX2-3Q8TAU0 364 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 ANKRD2Q9GZV1 360 aa12.96□□□□□ -0.34
SNRPA1-211ENST00000560433 PPFIA3O75145 1194 aa12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 Q6ZUG5 572 aa12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 FBXO33Q7Z6M2 555 aa12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 LCORLQ8N3X6 602 aa12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 CAMKK2Q96RR4 588 aa12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 GNL3LQ9NVN8 582 aaKnown RBP12.95□□□□□ -0.34
SNRPA1-211ENST00000560433 ST3GAL1Q11201 340 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 TSGA10IPQ3SY00 556 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 RBM17Q96I25 401 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 ZDHHC9Q9Y397 364 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 CYP7A1P22680 504 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 PRDX5P30044 214 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 ZNF384Q8TF68 577 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 STRBPQ96SI9 672 aaKnown RBP12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 PARP3Q9Y6F1 533 aa12.94□□□□□ -0.34
SNRPA1-211ENST00000560433 SMIM22K7EJ46 135 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 UFL1O94874 794 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 FGD1P98174 961 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 SLC15A2Q16348 729 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 SDR42E1Q8WUS8 393 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 BRF1Q92994 677 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 ZNF219Q9P2Y4 722 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 MCM4P33991 863 aa12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 DYNLL1P63167 89 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 IMMTQ16891 758 aaKnown RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 EPB41L4AQ9HCS5 686 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 CIZ1Q9ULV3 898 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 NAP1L2Q9ULW6 460 aaPredicted RBP12.93□□□□□ -0.34
SNRPA1-211ENST00000560433 ZNF213O14771 459 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 KRT32Q14532 448 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 LAMA4Q16363 1823 aa12.92□□□□□ -0.34
SNRPA1-211ENST00000560433 XDHP47989 1333 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms