RNA–Protein interactions for RNA: ENST00000560131.1

TPM1-222, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 537 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-222ENST00000560131 PI16Q6UXB8 463 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 ZNF438Q7Z4V0 828 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 ZNF280CQ8ND82 737 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 FRAT1Q92837 279 aaPredicted RBP6.69□□□□□ -1.34
TPM1-222ENST00000560131 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 KRTAP9-4Q9BYQ2 154 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 ARHGEF12Q9NZN5 1544 aa6.69□□□□□ -1.34
TPM1-222ENST00000560131 TLDC2A0PJX2 215 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 UBAP1LF5GYI3 381 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 BCRP11274 1271 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 INPP5BP32019 993 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 GAS6Q14393 721 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 NBPF10Q6P3W6 841 aaKnown RBP6.68□□□□□ -1.34
TPM1-222ENST00000560131 CMTR1Q8N1G2 835 aaKnown RBP6.68□□□□□ -1.34
TPM1-222ENST00000560131 ELP3Q9H9T3 547 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 TMA7Q9Y2S6 64 aaKnown RBP6.68□□□□□ -1.34
TPM1-222ENST00000560131 RTCBQ9Y3I0 505 aaKnown RBP6.68□□□□□ -1.34
TPM1-222ENST00000560131 LAS1LQ9Y4W2 734 aaKnown RBP6.68□□□□□ -1.34
TPM1-222ENST00000560131 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
TPM1-222ENST00000560131 RALGAPBQ86X10 1494 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 KRBA1A5PL33 1030 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 SPATA31C2B4DYI2 1134 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 EIF5BO60841 1220 aaKnown RBP6.67□□□□□ -1.34
TPM1-222ENST00000560131 PHACTR2O75167 634 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 USP17L7P0C7H9 530 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 GJA8P48165 433 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 MEI1Q5TIA1 1274 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 BICDL1Q6ZP65 573 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 PMFBP1Q8TBY8 1022 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 NEUROD4Q9HD90 331 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 RCAN3Q9UKA8 241 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 USP20Q9Y2K6 914 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 DNMT1P26358 1616 aaKnown RBP6.67□□□□□ -1.34
TPM1-222ENST00000560131 KDM2BQ8NHM5 1336 aa6.67□□□□□ -1.34
TPM1-222ENST00000560131 MYBBP1AQ9BQG0 1328 aaKnown RBP6.67□□□□□ -1.34
TPM1-222ENST00000560131 CENPJQ9HC77 1338 aaPredicted RBP6.67□□□□□ -1.34
TPM1-222ENST00000560131 BLMP54132 1417 aaPredicted RBP6.67□□□□□ -1.34
TPM1-222ENST00000560131 KDM6BO15054 1643 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 STK10O94804 968 aaKnown RBP6.66□□□□□ -1.34
TPM1-222ENST00000560131 ATF4P18848 351 aaPredicted RBP6.66□□□□□ -1.34
TPM1-222ENST00000560131 NXPE4Q6UWF7 544 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 BTLAQ7Z6A9 289 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 MCF2L2Q86YR7 1114 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 GALNT12Q8IXK2 581 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 EXOC6Q8TAG9 804 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 KLRG1Q96E93 195 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 HSH2DQ96JZ2 352 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 MPHOSPH9Q99550 1183 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 BCO2Q9BYV7 579 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 CLASP1Q7Z460 1538 aa6.66□□□□□ -1.34
TPM1-222ENST00000560131 DNMBPQ6XZF7 1577 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 ANKRD62A6NC57 917 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 FGRP09769 529 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 PHKA2P46019 1235 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 PAK2Q13177 524 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 TRIP4Q15650 581 aaPredicted RBP6.65□□□□□ -1.34
TPM1-222ENST00000560131 NBPF8Q3BBV2 869 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 CENPQQ7L2Z9 268 aaPredicted RBP6.65□□□□□ -1.34
TPM1-222ENST00000560131 PMEPA1Q969W9 287 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.65□□□□□ -1.34
TPM1-222ENST00000560131 NPHS2Q9NP85 383 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 MBIPQ9NS73 344 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 TMEM63CQ9P1W3 806 aa6.65□□□□□ -1.34
TPM1-222ENST00000560131 ISY1Q9ULR0 285 aaKnown RBP6.65□□□□□ -1.34
TPM1-222ENST00000560131 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 GADD45BO75293 160 aaPredicted RBP6.64□□□□□ -1.35
TPM1-222ENST00000560131 WDR44Q5JSH3 913 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 ALYREFQ86V81 257 aaKnown RBP6.64□□□□□ -1.35
TPM1-222ENST00000560131 GPRASP2Q96D09 838 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 ZIC5Q96T25 663 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 INSM2Q96T92 566 aaPredicted RBP6.64□□□□□ -1.35
TPM1-222ENST00000560131 RSRP1Q9BUV0 290 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 NOC4LQ9BVI4 516 aaKnown RBP6.64□□□□□ -1.35
TPM1-222ENST00000560131 ZSWIM4Q9H7M6 989 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 C11orf16Q9NQ32 467 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 EIF3AQ14152 1382 aaKnown RBP6.64□□□□□ -1.35
TPM1-222ENST00000560131 PARD3Q8TEW0 1356 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 USP47Q96K76 1375 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 LAMC1P11047 1609 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 ADGBQ8N7X0 1667 aa6.64□□□□□ -1.35
TPM1-222ENST00000560131 SENP3-EIF4A1A0A087X0R7 540 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 POLR3DP05423 398 aaPredicted RBP6.63□□□□□ -1.35
TPM1-222ENST00000560131 EPB42P16452 691 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 POU4F2Q12837 409 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 MAGI3Q5TCQ9 1506 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 ANKRD13AQ8IZ07 590 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 RASGRP4Q8TDF6 673 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 OSBPL2Q9H1P3 480 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 CHRDQ9H2X0 955 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 SUV39H2Q9H5I1 410 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 PIF1Q9H611 641 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 POLMQ9NP87 494 aaPredicted RBP6.63□□□□□ -1.35
TPM1-222ENST00000560131 COPRSQ9NQ92 184 aa6.63□□□□□ -1.35
TPM1-222ENST00000560131 NESP48681 1621 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 ADGRL2O95490 1459 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 PZPP20742 1482 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 SCAPERQ9BY12 1400 aa6.62□□□□□ -1.35
TPM1-222ENST00000560131 EREGO14944 169 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms