RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 NAA16Q6N069 864 aaPredicted RBP13.3□□□□□ -0.28
CLPX-204ENST00000559152 RALYLQ86SE5 291 aaKnown RBP13.3□□□□□ -0.28
CLPX-204ENST00000559152 NGLY1Q96IV0 654 aa13.3□□□□□ -0.28
CLPX-204ENST00000559152 IDH1O75874 414 aaKnown RBP13.29□□□□□ -0.28
CLPX-204ENST00000559152 PHKA1P46020 1223 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 TRDNQ13061 729 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 SPATA5Q8NB90 893 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 RTN4Q9NQC3 1192 aaKnown RBP13.29□□□□□ -0.28
CLPX-204ENST00000559152 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 APOBRQ0VD83 1088 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 FAM98CQ17RN3 349 aaKnown RBP13.29□□□□□ -0.28
CLPX-204ENST00000559152 TTLL5Q6EMB2 1281 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 LRRC2Q9BYS8 371 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
CLPX-204ENST00000559152 FAM177BA6PVY3 158 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 JAK2O60674 1132 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 PDIA3P30101 505 aaKnown RBP13.28□□□□□ -0.28
CLPX-204ENST00000559152 NSUN7Q8NE18 718 aaKnown RBP13.28□□□□□ -0.28
CLPX-204ENST00000559152 PIH1D3Q9NQM4 214 aaKnown RBP13.28□□□□□ -0.28
CLPX-204ENST00000559152 ZNF532Q9HCE3 1301 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 GOLGA6L4A6NEF3 574 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 FOXP2O15409 715 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 KCNQ2O43526 872 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 PDE6AP16499 860 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 UVSSAQ2YD98 709 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 HS1BP3Q53T59 392 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 RC3H1Q5TC82 1133 aaKnown RBP13.28□□□□□ -0.28
CLPX-204ENST00000559152 ATL3Q6DD88 541 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 FERMT3Q86UX7 667 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 EP400Q96L91 3159 aa13.28□□□□□ -0.28
CLPX-204ENST00000559152 ZMYM6O95789 1325 aa13.27□□□□□ -0.28
CLPX-204ENST00000559152 ALX1Q15699 326 aa13.27□□□□□ -0.28
CLPX-204ENST00000559152 FNBP4Q8N3X1 1017 aaPredicted RBP13.27□□□□□ -0.28
CLPX-204ENST00000559152 HELBQ8NG08 1087 aaPredicted RBP13.27□□□□□ -0.28
CLPX-204ENST00000559152 AIDAQ96BJ3 306 aa13.27□□□□□ -0.28
CLPX-204ENST00000559152 SPATA32Q96LK8 384 aa13.27□□□□□ -0.28
CLPX-204ENST00000559152 ARAP2Q8WZ64 1704 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 PTPDC1A2A3K4 754 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 PRC1O43663 620 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 SF3B3Q15393 1217 aaKnown RBP13.27□□□□□ -0.29
CLPX-204ENST00000559152 MB21D2Q8IYB1 491 aaPredicted RBP13.27□□□□□ -0.29
CLPX-204ENST00000559152 RGS22Q8NE09 1264 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 DDX11Q96FC9 970 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 SEC31BQ9NQW1 1179 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 BCL9LQ86UU0 1499 aa13.27□□□□□ -0.29
CLPX-204ENST00000559152 APPP05067 770 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 GNAT2P19087 354 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 HAND2P61296 217 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 RESTQ13127 1097 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 LINC00116Q8NCU8 138 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 NYXQ9GZU5 481 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 GNL3LQ9NVN8 582 aaKnown RBP13.26□□□□□ -0.29
CLPX-204ENST00000559152 NAP1L2Q9ULW6 460 aaPredicted RBP13.26□□□□□ -0.29
CLPX-204ENST00000559152 LAMB2P55268 1798 aa13.26□□□□□ -0.29
CLPX-204ENST00000559152 COL5A3P25940 1745 aaPredicted RBP13.26□□□□□ -0.29
CLPX-204ENST00000559152 TCRBV5S4A2TA0A5A2 114 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 PATL2C9JE40 543 aaKnown RBP13.25□□□□□ -0.29
CLPX-204ENST00000559152 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 TTC6Q86TZ1 520 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 PDLIM2Q96JY6 352 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 AKAP11Q9UKA4 1901 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 SPATA31A6Q5VVP1 1343 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 SALL1Q9NSC2 1324 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 MYH7P12883 1935 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 A0A0G2JLW4 131 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 ESPNB1AK53 854 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 CTDNEP1O95476 244 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 CCT2P78371 535 aaKnown RBP13.25□□□□□ -0.29
CLPX-204ENST00000559152 CHRNDQ07001 517 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 SLC10A5Q5PT55 438 aa13.25□□□□□ -0.29
CLPX-204ENST00000559152 STRBPQ96SI9 672 aaKnown RBP13.25□□□□□ -0.29
CLPX-204ENST00000559152 LAMA4Q16363 1823 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 LEO1Q8WVC0 666 aaPredicted RBP13.24□□□□□ -0.29
CLPX-204ENST00000559152 WWC3Q9ULE0 1092 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 DDX60Q8IY21 1712 aaKnown RBP13.24□□□□□ -0.29
CLPX-204ENST00000559152 BCORQ6W2J9 1755 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 DTNBO60941 627 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 GTF2E1P29083 439 aaPredicted RBP13.24□□□□□ -0.29
CLPX-204ENST00000559152 CLCN1P35523 988 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 UBE4AQ14139 1066 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 CHST3Q7LGC8 479 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 MAGEB6Q8N7X4 407 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 TMEM87BQ96K49 555 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
CLPX-204ENST00000559152 NACAP1Q9BZK3 213 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 BSDC1Q9NW68 430 aaPredicted RBP13.24□□□□□ -0.29
CLPX-204ENST00000559152 NARFQ9UHQ1 456 aa13.24□□□□□ -0.29
CLPX-204ENST00000559152 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
CLPX-204ENST00000559152 KLF18A0A0U1RQI7 1052 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 RPS6KA4O75676 772 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 CNNM2Q9H8M5 875 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 DDX19AQ9NUU7 478 aaKnown RBP13.23□□□□□ -0.29
CLPX-204ENST00000559152 ANGEL1Q9UNK9 670 aaKnown RBP13.23□□□□□ -0.29
CLPX-204ENST00000559152 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 TCHHQ07283 1943 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 CPLX1O14810 134 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 ERFEQ4G0M1 354 aa13.23□□□□□ -0.29
CLPX-204ENST00000559152 NAPBQ9H115 298 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 107.1 ms