RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 ABI2Q9NYB9 513 aaPredicted RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 CYP8B1Q9UNU6 501 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 CDK11AQ9UQ88 783 aaPredicted RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 GTF3C5Q9Y5Q8 519 aaPredicted RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 TMEM238LA0A1B0GVL6 79 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 K7ESF4 209 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 ATXN7O15265 892 aaPredicted RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 SMNDC1O75940 238 aaKnown RBP eCLIP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 CES1P23141 567 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 ADD1P35611 737 aaKnown RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 SCTRP47872 440 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 GJA8P48165 433 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 USP48Q86UV5 1035 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 GPR152Q8TDT2 470 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 STAG1Q8WVM7 1258 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 ORAI3Q9BRQ5 295 aa1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 DDX41Q9UJV9 622 aaKnown RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 RTCBQ9Y3I0 505 aaKnown RBP1.96□□□□□ -2.1
CTDSPL2-202ENST00000558373 A0A1W2PNR3 127 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CARNS1A5YM72 827 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 OPLAHO14841 1288 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 GREM1O60565 184 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 XYLBO75191 536 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 GHRHP01286 108 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 ALAS2P22557 587 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 INPP5BP32019 993 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 MAP2K3P46734 347 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CABP4P57796 275 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 FANCCQ00597 558 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 SRSF11Q05519 484 aaKnown RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CRBNQ96SW2 442 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 KRTAP4-2Q9BYR5 136 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 LIN7BQ9HAP6 207 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CNTNAP5Q8WYK1 1306 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CCDC163A0A0D9SF12 145 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 SSBP05455 408 aaKnown RBP eCLIP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 RELBQ01201 579 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 AP3B2Q13367 1082 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 FOXD4L6Q3SYB3 417 aaPredicted RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 GPAT2Q6NUI2 795 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 FOXD4L3Q6VB84 417 aaPredicted RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 DTHD1Q6ZMT9 781 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CPLX3Q8WVH0 158 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 NT5C1AQ9BXI3 368 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 KRTAP4-9Q9BYQ8 210 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 BACH2Q9BYV9 841 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 CCDC87Q9NVE4 849 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TTF2Q9UNY4 1162 aaKnown RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 SUPT16HQ9Y5B9 1047 aaKnown RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 KCNMB2Q9Y691 235 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 KRBA1A5PL33 1030 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TTLL8A6PVC2 850 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 ITGA6P23229 1130 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 NRLP54845 237 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 LMNB2Q03252 620 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 LCE1DQ5T752 114 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 RNF187Q5TA31 235 aaPredicted RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 LINC00114Q6XXX2 140 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 KIAA0825Q8IV33 1275 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TMEM102Q8N9M5 508 aaPredicted RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 GPRASP2Q96D09 838 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TLR7Q9NYK1 1049 aaKnown RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 PRKAG2Q9UGJ0 569 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 ATXN7L1Q9ULK2 861 aaPredicted RBP1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 PRKAB1Q9Y478 270 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TET3O43151 1660 aa1.95□□□□□ -2.1
CTDSPL2-202ENST00000558373 TLDC2A0PJX2 215 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 NTF4P34130 210 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 SCNN1AP37088 669 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 ZNF165P49910 485 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 OR13H1Q8NG92 308 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 NKD1Q969G9 470 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 SAP130Q9H0E3 1048 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 NUCKS1Q9H1E3 243 aaKnown RBP1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 SOX17Q9H6I2 414 aaPredicted RBP1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 FRRS1LQ9P0K9 344 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 MARK1Q9P0L2 795 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 KLF15Q9UIH9 416 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 GGT7Q9UJ14 662 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 IQCA1LA6NCM1 817 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 UPK3BL1B0FP48 263 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 UPK3BL2E5RIL1 263 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 TNFRSF21O75509 655 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 VIL1P09327 827 aaKnown RBP1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 FGRP09769 529 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 PTPRAP18433 802 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 IRS1P35568 1242 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 IFRD2Q12894 506 aaPredicted RBP1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 RGL3Q3MIN7 710 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 CREB3L3Q68CJ9 461 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 NT5DC4Q86YG4 428 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 TRIM22Q8IYM9 498 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 RNF217Q8TC41 542 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 RHOVQ96L33 236 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 BUD13Q9BRD0 619 aaKnown RBP eCLIP1.94□□□□□ -2.17e-7■□□□□ 8.7
CTDSPL2-202ENST00000558373 CCDC113Q9H0I3 377 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 MSTNO14793 375 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 RARAP10276 462 aa1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 ALYREFQ86V81 257 aaKnown RBP1.94□□□□□ -2.1
CTDSPL2-202ENST00000558373 TMEM74Q96NL1 305 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms