RNA–Protein interactions for RNA: ENST00000558013.5

LDLR-207, Transcript of low density lipoprotein receptor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDLR, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-207ENST00000558013 CIAO1O76071 339 aa15.08■□□□□ 0
LDLR-207ENST00000558013 GREM2Q9H772 168 aa15.08■□□□□ 0
LDLR-207ENST00000558013 KCPQ6ZWJ8 1503 aa15.08■□□□□ 0
LDLR-207ENST00000558013 USP27XA6NNY8 438 aa15.08■□□□□ 0
LDLR-207ENST00000558013 UBE2Q2LH0YL09 131 aa15.08■□□□□ 0
LDLR-207ENST00000558013 KINO60870 393 aaKnown RBP15.08■□□□□ 0
LDLR-207ENST00000558013 MCAMP43121 646 aa15.08■□□□□ 0
LDLR-207ENST00000558013 NAA30Q147X3 362 aaPredicted RBP15.08■□□□□ 0
LDLR-207ENST00000558013 FILIP1Q7Z7B0 1213 aa15.08■□□□□ 0
LDLR-207ENST00000558013 DHX40Q8IX18 779 aaKnown RBP15.08■□□□□ 0
LDLR-207ENST00000558013 TJP1Q07157 1748 aa15.08■□□□□ 0
LDLR-207ENST00000558013 CPDO75976 1380 aa15.07■□□□□ 0
LDLR-207ENST00000558013 GOLGA6L19H0YKK7 550 aa15.07■□□□□ 0
LDLR-207ENST00000558013 BIN1O00499 593 aa15.07■□□□□ 0
LDLR-207ENST00000558013 GPAA1O43292 621 aa15.07■□□□□ 0
LDLR-207ENST00000558013 FAM160A1Q05DH4 1040 aa15.07■□□□□ 0
LDLR-207ENST00000558013 ISM2Q6H9L7 571 aa15.07■□□□□ 0
LDLR-207ENST00000558013 NBPF3Q9H094 633 aa15.07■□□□□ 0
LDLR-207ENST00000558013 PKD1L3Q7Z443 1732 aa15.07■□□□□ 0
LDLR-207ENST00000558013 GTF2F1P35269 517 aaKnown RBP eCLIP15.07■□□□□ 02e-14■□□□□ 9.4
LDLR-207ENST00000558013 IMMTQ16891 758 aaKnown RBP15.07■□□□□ 0
LDLR-207ENST00000558013 HELBQ8NG08 1087 aaPredicted RBP15.07■□□□□ 0
LDLR-207ENST00000558013 PIGBQ92521 554 aa15.07■□□□□ 0
LDLR-207ENST00000558013 PRDM10Q9NQV6 1147 aa15.07■□□□□ 0
LDLR-207ENST00000558013 ORC3Q9UBD5 711 aaPredicted RBP15.07■□□□□ 0
LDLR-207ENST00000558013 IFIT5Q13325 482 aaKnown RBP15.06■□□□□ 0
LDLR-207ENST00000558013 MB21D2Q8IYB1 491 aaPredicted RBP15.06■□□□□ 0
LDLR-207ENST00000558013 AOPEPQ8N6M6 819 aa15.06■□□□□ 0
LDLR-207ENST00000558013 KAT6BQ8WYB5 2073 aa15.06■□□□□ 0
LDLR-207ENST00000558013 LDHAL6AQ6ZMR3 332 aa15.06■□□□□ 0
LDLR-207ENST00000558013 C8orf76Q96K31 380 aa15.06■□□□□ 0
LDLR-207ENST00000558013 SDF4Q9BRK5 362 aa15.06■□□□□ 0
LDLR-207ENST00000558013 BECN2A8MW95 431 aa15.06■□□□□ 0
LDLR-207ENST00000558013 TPM3P06753 285 aa15.06■□□□□ 0
LDLR-207ENST00000558013 STX1AQ16623 288 aa15.06■□□□□ 0
LDLR-207ENST00000558013 METTL24Q5JXM2 366 aa15.06■□□□□ 0
LDLR-207ENST00000558013 FMR1NBQ8N0W7 255 aaPredicted RBP15.06■□□□□ 0
LDLR-207ENST00000558013 ZNF396Q96N95 335 aaPredicted RBP15.06■□□□□ 0
LDLR-207ENST00000558013 TMOD3Q9NYL9 352 aa15.06■□□□□ 0
LDLR-207ENST00000558013 ITGA6P23229 1130 aa15.05■□□□□ -0
LDLR-207ENST00000558013 EVA1CP58658 441 aa15.05■□□□□ -0
LDLR-207ENST00000558013 DPCR1Q3MIW9 517 aa15.05■□□□□ -0
LDLR-207ENST00000558013 KLHL34Q8N239 644 aa15.05■□□□□ -0
LDLR-207ENST00000558013 LINC00301Q8NCQ3 95 aa15.05■□□□□ -0
LDLR-207ENST00000558013 ATG3Q9NT62 314 aa15.05■□□□□ -0
LDLR-207ENST00000558013 IDH1O75874 414 aaKnown RBP15.05■□□□□ -0
LDLR-207ENST00000558013 MARCKSP29966 332 aaPredicted RBP15.05■□□□□ -0
LDLR-207ENST00000558013 NKX1-1Q15270 411 aaPredicted RBP15.05■□□□□ -0
LDLR-207ENST00000558013 ATP2B3Q16720 1220 aa15.05■□□□□ -0
LDLR-207ENST00000558013 SLC9C2Q5TAH2 1124 aa15.05■□□□□ -0
LDLR-207ENST00000558013 ZNF213O14771 459 aa15.04■□□□□ -0
LDLR-207ENST00000558013 APPP05067 770 aa15.04■□□□□ -0
LDLR-207ENST00000558013 SF3A1Q15459 793 aaKnown RBP15.04■□□□□ -0
LDLR-207ENST00000558013 CYB5R4Q7L1T6 521 aa15.04■□□□□ -0
LDLR-207ENST00000558013 TBC1D10CQ8IV04 446 aa15.04■□□□□ -0
LDLR-207ENST00000558013 FBXO18Q8NFZ0 1043 aa15.04■□□□□ -0
LDLR-207ENST00000558013 ZNF592Q92610 1267 aa15.04■□□□□ -0
LDLR-207ENST00000558013 APPBP2Q92624 585 aa15.04■□□□□ -0
LDLR-207ENST00000558013 MAP7D2Q96T17 732 aa15.04■□□□□ -0
LDLR-207ENST00000558013 MYL10Q9BUA6 226 aa15.04■□□□□ -0
LDLR-207ENST00000558013 PIH1D3Q9NQM4 214 aaKnown RBP15.04■□□□□ -0
LDLR-207ENST00000558013 STK38Q15208 465 aa15.04■□□□□ -0
LDLR-207ENST00000558013 PHKBQ93100 1093 aa15.04■□□□□ -0
LDLR-207ENST00000558013 RIPOR2Q9Y4F9 1068 aa15.04■□□□□ -0
LDLR-207ENST00000558013 NUP188Q5SRE5 1749 aa15.04■□□□□ -0
LDLR-207ENST00000558013 NWD2Q9ULI1 1742 aa15.04■□□□□ -0
LDLR-207ENST00000558013 CPLX1O14810 134 aa15.03■□□□□ -0
LDLR-207ENST00000558013 TNNT1P13805 278 aa15.03■□□□□ -0
LDLR-207ENST00000558013 EVCP57679 992 aa15.03■□□□□ -0
LDLR-207ENST00000558013 LRRC8AQ8IWT6 810 aa15.03■□□□□ -0
LDLR-207ENST00000558013 TTLL11Q8NHH1 800 aa15.03■□□□□ -0
LDLR-207ENST00000558013 MRPS27Q92552 414 aaKnown RBP15.03■□□□□ -0
LDLR-207ENST00000558013 SLC4A9Q96Q91 983 aa15.03■□□□□ -0
LDLR-207ENST00000558013 TRMT1Q9NXH9 659 aaKnown RBP15.03■□□□□ -0
LDLR-207ENST00000558013 AKAP2Q9Y2D5 859 aa15.03■□□□□ -0
LDLR-207ENST00000558013 COL5A2P05997 1499 aaPredicted RBP15.03■□□□□ -0
LDLR-207ENST00000558013 CSF1RP07333 972 aa15.03■□□□□ -0
LDLR-207ENST00000558013 RALYLQ86SE5 291 aaKnown RBP15.03■□□□□ -0
LDLR-207ENST00000558013 STK11IPQ8N1F8 1099 aa15.03■□□□□ -0
LDLR-207ENST00000558013 ZBTB38Q8NAP3 1195 aaPredicted RBP15.03■□□□□ -0
LDLR-207ENST00000558013 RTEL1Q9NZ71 1219 aa15.03■□□□□ -0
LDLR-207ENST00000558013 NEDD4P46934 1319 aa15.03■□□□□ -0
LDLR-207ENST00000558013 PCCAP05165 728 aaPredicted RBP15.03■□□□□ -0
LDLR-207ENST00000558013 PHKA1P46020 1223 aa15.03■□□□□ -0
LDLR-207ENST00000558013 CHAF1AQ13111 956 aaPredicted RBP15.03■□□□□ -0
LDLR-207ENST00000558013 SYTL4Q96C24 671 aaPredicted RBP15.03■□□□□ -0
LDLR-207ENST00000558013 CNNM1Q9NRU3 951 aa15.03■□□□□ -0
LDLR-207ENST00000558013 CTNNA3Q9UI47 895 aa15.03■□□□□ -0
LDLR-207ENST00000558013 LAMB4A4D0S4 1761 aa15.03■□□□□ -0
LDLR-207ENST00000558013 TPD52L1Q16890 204 aaPredicted RBP15.02■□□□□ -0
LDLR-207ENST00000558013 PPP4R3BQ5MIZ7 849 aa15.02■□□□□ -0
LDLR-207ENST00000558013 MYSM1Q5VVJ2 828 aa15.02■□□□□ -0
LDLR-207ENST00000558013 ADALQ6DHV7 355 aa15.02■□□□□ -0
LDLR-207ENST00000558013 NCOA7Q8NI08 942 aa15.02■□□□□ -0
LDLR-207ENST00000558013 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
LDLR-207ENST00000558013 TBC1D2BQ9UPU7 963 aa15.02■□□□□ -0
LDLR-207ENST00000558013 SPDYE4A6NLX3 237 aa15.02□□□□□ -0.01
LDLR-207ENST00000558013 B4E1Z4 1266 aa15.02□□□□□ -0.01
LDLR-207ENST00000558013 WDHD1O75717 1129 aaPredicted RBP15.02□□□□□ -0.01
LDLR-207ENST00000558013 CBX1P83916 185 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms