RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 PTPN12Q05209 780 aaKnown RBP7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 MEI1Q5TIA1 1274 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 RHPN1Q8TCX5 695 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 EPS8L3Q8TE67 593 aaKnown RBP7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 CCDC74AQ96AQ1 378 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 HIRIP3Q9BW71 556 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 OSBPL7Q9BZF2 842 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 TIMMDC1Q9NPL8 285 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 FOXD3Q9UJU5 478 aaPredicted RBP7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 KDM5CP41229 1560 aa7.1□□□□□ -1.27
MTHFD1-216ENST00000557539 ZNF142P52746 1687 aaPredicted RBP7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 PITPNM2Q9BZ72 1349 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 FAM83GA6ND36 823 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 TNFRSF21O75509 655 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 PHKA2P46019 1235 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 PLA2G4AP47712 749 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 RBL2Q08999 1139 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 PIF1Q9H611 641 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 ZSWIM4Q9H7M6 989 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 MBIPQ9NS73 344 aa7.09□□□□□ -1.27
MTHFD1-216ENST00000557539 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 TLDC2A0PJX2 215 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 TGFBR3LH3BV60 316 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 H7C1W4 665 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 GIPC1O14908 333 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 STK10O94804 968 aaKnown RBP7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 F11P03951 625 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 BAG6P46379 1132 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 RASSF7Q02833 373 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 TAF1CQ15572 869 aaPredicted RBP7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 GNASQ5JWF2 1037 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 ZNF662Q6ZS27 426 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 ZNF438Q7Z4V0 828 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 ANKLE2Q86XL3 938 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 MCF2L2Q86YR7 1114 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 AIDAQ96BJ3 306 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 USP20Q9Y2K6 914 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 IGF1RP08069 1367 aa7.08□□□□□ -1.28
MTHFD1-216ENST00000557539 POLR1AO95602 1720 aaPredicted RBP7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 USP17L7P0C7H9 530 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 IDH3AP50213 366 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 HIF1AQ16665 826 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 C4orf17Q53FE4 359 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 SOGA3Q5TF21 947 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 SNX29Q8TEQ0 813 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.07□□□□□ -1.287e-6■□□□□ 9.4
MTHFD1-216ENST00000557539 NUCKS1Q9H1E3 243 aaKnown RBP7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 SPON1Q9HCB6 807 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 ZFYVE28Q9HCC9 887 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 FAM8A1Q9UBU6 413 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 HECW1Q76N89 1606 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 ABCA9Q8IUA7 1624 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 MYO3AQ8NEV4 1616 aa7.07□□□□□ -1.28
MTHFD1-216ENST00000557539 CACNA1AO00555 2505 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 COL16A1Q07092 1604 aaPredicted RBP7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 PHACTR2O75167 634 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 PAK2Q13177 524 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 UBAP2LQ14157 1087 aaKnown RBP7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 CMTR1Q8N1G2 835 aaKnown RBP7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 JMYQ8N9B5 988 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 ZNF280CQ8ND82 737 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 ACDQ96AP0 544 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 KLRG1Q96E93 195 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 HSH2DQ96JZ2 352 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 SUSD3Q96L08 255 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 GPAMQ9HCL2 828 aa7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 FNDC3AQ9Y2H6 1198 aaKnown RBP7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 NPHP4O75161 1426 aaPredicted RBP7.06□□□□□ -1.28
MTHFD1-216ENST00000557539 GADD45BO75293 160 aaPredicted RBP7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 GDF11O95390 407 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 POLR3DP05423 398 aaPredicted RBP7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 FGRP09769 529 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 GJA8P48165 433 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 ST13P50502 369 aaKnown RBP7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 NBPF1Q3BBV0 1214 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 SDE2Q6IQ49 451 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 NXPE4Q6UWF7 544 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 TMEM151AQ8N4L1 468 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 NPHS2Q9NP85 383 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 COPRSQ9NQ92 184 aa7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 TRPC5Q9UL62 973 aaPredicted RBP7.05□□□□□ -1.28
MTHFD1-216ENST00000557539 CNTLNQ9NXG0 1405 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 ATF4P18848 351 aaPredicted RBP7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 ARSDP51689 593 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 BMS1Q14692 1282 aaKnown RBP7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 XKR5Q6UX68 686 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 BICDL1Q6ZP65 573 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 C7orf43Q8WVR3 580 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 GPRASP2Q96D09 838 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 ELP3Q9H9T3 547 aa7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 DMGDHQ9UI17 866 aaKnown RBP7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 RTCBQ9Y3I0 505 aaKnown RBP7.04□□□□□ -1.28
MTHFD1-216ENST00000557539 A0A1B0GTH6 734 aa7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 RNF225M0QZC1 329 aaPredicted RBP7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 TATP17735 454 aaPredicted RBP7.03□□□□□ -1.28
MTHFD1-216ENST00000557539 MSX1P28360 303 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms