RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 AEBP1Q8IUX7 1158 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
CHD8-212ENST00000557329 BSNDQ8WZ55 320 aa6.71□□□□□ -1.34
CHD8-212ENST00000557329 BHLHE41Q9C0J9 482 aaPredicted RBP6.71□□□□□ -1.34
CHD8-212ENST00000557329 MRPL18Q9H0U6 180 aaKnown RBP6.71□□□□□ -1.34
CHD8-212ENST00000557329 FOXD3Q9UJU5 478 aaPredicted RBP6.71□□□□□ -1.34
CHD8-212ENST00000557329 H3BRJ5 948 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 ITGAEP38570 1179 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 ATP11AP98196 1134 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD8-212ENST00000557329 PRSS36Q5K4E3 855 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 KIAA0319Q5VV43 1072 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 SND1Q7KZF4 910 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHD8-212ENST00000557329 FBF1Q8TES7 1133 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 NXPE3Q969Y0 559 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 ASB16Q96NS5 453 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 TRIM33Q9UPN9 1127 aa6.7□□□□□ -1.34
CHD8-212ENST00000557329 H2AFB1P0C5Y9 115 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 H2AFB2P0C5Z0 115 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
CHD8-212ENST00000557329 HP1BP3Q5SSJ5 553 aaPredicted RBP6.69□□□□□ -1.34
CHD8-212ENST00000557329 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 HOMEZQ8IX15 550 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 TMEM130Q8N3G9 435 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 POP1Q99575 1024 aaKnown RBP6.69□□□□□ -1.34
CHD8-212ENST00000557329 NIF3L1Q9GZT8 377 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 SOX17Q9H6I2 414 aaPredicted RBP6.69□□□□□ -1.34
CHD8-212ENST00000557329 NLRP2Q9NX02 1062 aa6.69□□□□□ -1.34
CHD8-212ENST00000557329 ARAP1Q96P48 1450 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 NFKBIEO00221 500 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 EIF1AYO14602 144 aaKnown RBP6.68□□□□□ -1.34
CHD8-212ENST00000557329 GIPC1O14908 333 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 TREHO43280 583 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 XRCC5P13010 732 aaKnown RBP6.68□□□□□ -1.34
CHD8-212ENST00000557329 ATP2B2Q01814 1243 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 ALG1LQ6GMV1 187 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 TMC7Q7Z402 723 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 FRMD6Q96NE9 622 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 ZKSCAN3Q9BRR0 538 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 SRCIN1Q9C0H9 1055 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 USP21Q9UK80 565 aa6.68□□□□□ -1.34
CHD8-212ENST00000557329 ZNF608Q9ULD9 1512 aaPredicted RBP6.67□□□□□ -1.34
CHD8-212ENST00000557329 MROH2BQ7Z745 1585 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 DLL1O00548 723 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 GPR182O15218 404 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 IGHA2P01877 340 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 LRP8Q14114 963 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 ADGRE1Q14246 886 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 DSC3Q14574 896 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 TXNRD3Q86VQ6 643 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 CCNJLQ8IV13 435 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 LACRTQ9GZZ8 138 aa6.67□□□□□ -1.34
CHD8-212ENST00000557329 FAM229AH3BQW9 127 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 FSCN2O14926 492 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 CD68P34810 354 aaPredicted RBP6.66□□□□□ -1.34
CHD8-212ENST00000557329 SETDB1Q15047 1291 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 GRIK4Q16099 956 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 RPS26P11Q5JNZ5 115 aaPredicted RBP6.66□□□□□ -1.34
CHD8-212ENST00000557329 CCDC74AQ96AQ1 378 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 BCL11AQ9H165 835 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 EHD4Q9H223 541 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 LIN7BQ9HAP6 207 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 SOX13Q9UN79 622 aa6.66□□□□□ -1.34
CHD8-212ENST00000557329 URB2Q14146 1524 aaKnown RBP6.66□□□□□ -1.34
CHD8-212ENST00000557329 A0A1W2PP55 124 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 ZBTB7CA1YPR0 619 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 LINC01387J3KSC0 135 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 C19orf57Q0VDD7 668 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 IKBKEQ14164 716 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 PEAR1Q5VY43 1037 aaPredicted RBP6.65□□□□□ -1.34
CHD8-212ENST00000557329 PRPF40BQ6NWY9 871 aaKnown RBP6.65□□□□□ -1.34
CHD8-212ENST00000557329 CEP41Q9BYV8 373 aa6.65□□□□□ -1.34
CHD8-212ENST00000557329 A0A096LPE4 126 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 A0A1W2PPZ6 126 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 GADD45BO75293 160 aaPredicted RBP6.64□□□□□ -1.35
CHD8-212ENST00000557329 DEAF1O75398 565 aaPredicted RBP6.64□□□□□ -1.35
CHD8-212ENST00000557329 SELPP16109 830 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 FMR1Q06787 632 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHD8-212ENST00000557329 ORC1Q13415 861 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 MBTPS1Q14703 1052 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
CHD8-212ENST00000557329 ASAP3Q8TDY4 903 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 CLEC4MQ9H2X3 399 aaPredicted RBP6.64□□□□□ -1.35
CHD8-212ENST00000557329 AKTIPQ9H8T0 292 aa6.64□□□□□ -1.35
CHD8-212ENST00000557329 EPHA1P21709 976 aa6.63□□□□□ -1.35
CHD8-212ENST00000557329 ITPKAP23677 461 aa6.63□□□□□ -1.35
CHD8-212ENST00000557329 UVSSAQ2YD98 709 aa6.63□□□□□ -1.35
CHD8-212ENST00000557329 SLC51AQ86UW1 340 aa6.63□□□□□ -1.35
CHD8-212ENST00000557329 NPHS2Q9NP85 383 aa6.63□□□□□ -1.35
CHD8-212ENST00000557329 PEG3Q9GZU2 1588 aa6.62□□□□□ -1.35
CHD8-212ENST00000557329 AQRO60306 1485 aaKnown RBP eCLIP6.62□□□□□ -1.35
CHD8-212ENST00000557329 CYP11A1P05108 521 aa6.62□□□□□ -1.35
CHD8-212ENST00000557329 TCF12Q99081 682 aa6.62□□□□□ -1.35
CHD8-212ENST00000557329 SH2B1Q9NRF2 756 aaPredicted RBP6.62□□□□□ -1.35
CHD8-212ENST00000557329 SPG7Q9UQ90 795 aa6.62□□□□□ -1.35
CHD8-212ENST00000557329 IFT140Q96RY7 1462 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 PNMA6FA0A0J9YX94 578 aa6.61□□□□□ -1.35
CHD8-212ENST00000557329 HYAL3O43820 417 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms