RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 KHNYNO15037 678 aaKnown RBP7.02□□□□□ -1.29
SCFD1-223ENST00000557076 MCM6Q14566 821 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 CFAP70Q5T0N1 1121 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 SAMD5Q5TGI4 173 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 CHSY3Q70JA7 882 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 DNAJC5GQ8N7S2 189 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 MARCH10Q8NA82 808 aaPredicted RBP7.02□□□□□ -1.29
SCFD1-223ENST00000557076 NOD1Q9Y239 953 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 CPDO75976 1380 aa7.02□□□□□ -1.29
SCFD1-223ENST00000557076 OVOS2A0A0G2JMS6 1433 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 OVOS2A0A0J9YW53 1432 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 OVOS2Q6IE36 1432 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 NUP188Q5SRE5 1749 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 RREB1Q92766 1687 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 EIF3AQ14152 1382 aaKnown RBP7.01□□□□□ -1.29
SCFD1-223ENST00000557076 CD33P20138 364 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 LAMC2Q13753 1193 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 ZIC5Q96T25 663 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 HIRIP3Q9BW71 556 aaPredicted RBP7.01□□□□□ -1.29
SCFD1-223ENST00000557076 PCDHGA11Q9Y5H2 935 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 FMN2Q9NZ56 1722 aa7.01□□□□□ -1.29
SCFD1-223ENST00000557076 AATKQ6ZMQ8 1374 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 GCP02774 474 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 POLD1P28340 1107 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 ZNF468Q5VIY5 522 aaPredicted RBP7□□□□□ -1.29
SCFD1-223ENST00000557076 NUTM2GQ5VZR2 741 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 NLRP13Q86W25 1043 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 FCHSD1Q86WN1 690 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 WWC1Q8IX03 1113 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 ABTB2Q8N961 1025 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 NFATC2IPQ8NCF5 419 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 NUDT16Q96DE0 195 aaKnown RBP7□□□□□ -1.29
SCFD1-223ENST00000557076 PRR12Q9ULL5 1215 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 PIK3C2GO75747 1445 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 SPATA31E1Q6ZUB1 1445 aa7□□□□□ -1.29
SCFD1-223ENST00000557076 NRKQ7Z2Y5 1582 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 KIF1BO60333 1816 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 C1QTNF9BB2RNN3 333 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 EXOC5O00471 708 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 XP32Q5T750 250 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 BICDL1Q6ZP65 573 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 MARK1Q9P0L2 795 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 KLF15Q9UIH9 416 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 GPC6Q9Y625 555 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-223ENST00000557076 USP3Q9Y6I4 520 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 DLC1Q96QB1 1528 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 PCNTO95613 3336 aa6.99□□□□□ -1.29
SCFD1-223ENST00000557076 PIK3CDO00329 1044 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 EFSO43281 561 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 FURINP09958 794 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 SKIP12755 728 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 YBX3P16989 372 aaKnown RBP eCLIP6.98□□□□□ -1.296e-7■■■□□ 16.2
SCFD1-223ENST00000557076 PRELPP51888 382 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 GTF2IP78347 998 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 SCHIP1Q9P0W5 487 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-223ENST00000557076 TRAK1Q9UPV9 953 aa6.98□□□□□ -1.29
SCFD1-223ENST00000557076 CASZ1Q86V15 1759 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 PCBP4P57723 403 aaKnown RBP6.97□□□□□ -1.29
SCFD1-223ENST00000557076 CRB1P82279 1406 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 COL13A1Q5TAT6 717 aaPredicted RBP6.97□□□□□ -1.29
SCFD1-223ENST00000557076 TOM1L2Q6ZVM7 507 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 CD163Q86VB7 1156 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 HCN2Q9UL51 889 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 COG6Q9Y2V7 657 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 USP19O94966 1318 aa6.97□□□□□ -1.29
SCFD1-223ENST00000557076 ELOA3CA0A087WX78 387 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-223ENST00000557076 SPDYE3A6NKU9 549 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ELOA3DA6NLF2 546 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ALAS2P22557 587 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 CHRNA4P43681 627 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 TEAD4Q15561 434 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ELOA3BQ3SY89 546 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 NLGN2Q8NFZ4 835 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ELOA3Q8NG57 546 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 CARD10Q9BWT7 1032 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ALG2Q9H553 416 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ZNF358Q9NW07 568 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ATP7BP35670 1465 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 MYOM1P52179 1685 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ALS2Q96Q42 1657 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ACEP12821 1306 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 ABCA3Q99758 1704 aa6.96□□□□□ -1.3
SCFD1-223ENST00000557076 TRPM3Q9HCF6 1732 aaPredicted RBP6.96□□□□□ -1.3
SCFD1-223ENST00000557076 POLR3AO14802 1390 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-223ENST00000557076 RGPD8O14715 1765 aaPredicted RBP6.95□□□□□ -1.3
SCFD1-223ENST00000557076 PPLO60437 1756 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 ATP10DQ9P241 1426 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 EML1O00423 815 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 SPATA31C1P0DKV0 1188 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 NOS2P35228 1153 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 TXLNAP40222 546 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 NCOA4Q13772 614 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 ZNF827Q17R98 1081 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.95□□□□□ -1.3
SCFD1-223ENST00000557076 MPHOSPH9Q99550 1183 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 CDK19Q9BWU1 502 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 NEUROD4Q9HD90 331 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 PARP3Q9Y6F1 533 aa6.95□□□□□ -1.3
SCFD1-223ENST00000557076 COL5A2P05997 1499 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms