RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 BCO2Q9BYV7 579 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 ABCB6Q9NP58 842 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 RNF19AQ9NV58 838 aa10.23□□□□□ -0.77
LINC00871-204ENST00000556886 A0A096LPE4 126 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 DEAF1O75398 565 aaPredicted RBP10.22□□□□□ -0.77
LINC00871-204ENST00000556886 RAC1P63000 192 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 PRRT3Q5FWE3 981 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 PRPF40BQ6NWY9 871 aaKnown RBP10.22□□□□□ -0.77
LINC00871-204ENST00000556886 NXPE4Q6UWF7 544 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 VN1R5Q7Z5H4 357 aa10.22□□□□□ -0.77
LINC00871-204ENST00000556886 RASSF7Q02833 373 aa10.21□□□□□ -0.77
LINC00871-204ENST00000556886 SETDB1Q15047 1291 aa10.21□□□□□ -0.77
LINC00871-204ENST00000556886 DTWD1Q8N5C7 304 aa10.21□□□□□ -0.77
LINC00871-204ENST00000556886 DUSP9Q99956 384 aaKnown RBP10.21□□□□□ -0.77
LINC00871-204ENST00000556886 TRAK1Q9UPV9 953 aa10.21□□□□□ -0.77
LINC00871-204ENST00000556886 NCAPD3P42695 1498 aa10.21□□□□□ -0.78
LINC00871-204ENST00000556886 TMEM238LA0A1B0GVL6 79 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 H3BRJ5 948 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 CABP4P57796 275 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 EEA1Q15075 1411 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 DCAF5Q96JK2 942 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 BCL2L13Q9BXK5 485 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 OSBPL7Q9BZF2 842 aa10.2□□□□□ -0.78
LINC00871-204ENST00000556886 GRIK4Q16099 956 aa10.19□□□□□ -0.78
LINC00871-204ENST00000556886 FBXO11Q86XK2 927 aa10.19□□□□□ -0.78
LINC00871-204ENST00000556886 CARD10Q9BWT7 1032 aa10.19□□□□□ -0.78
LINC00871-204ENST00000556886 SPG7Q9UQ90 795 aa10.19□□□□□ -0.78
LINC00871-204ENST00000556886 FSCN2O14926 492 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 ELNP15502 786 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 ITPKAP23677 461 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 GNA15P30679 374 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 FCGRTP55899 365 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 FGD1P98174 961 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 FAM117BQ6P1L5 589 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 GALNT11Q8NCW6 608 aa10.18□□□□□ -0.78
LINC00871-204ENST00000556886 IKBKEQ14164 716 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 HGSNATQ68CP4 663 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 ALYREFQ86V81 257 aaKnown RBP10.17□□□□□ -0.78
LINC00871-204ENST00000556886 MAP4K3Q8IVH8 894 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 GIPC2Q8TF65 315 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 SLC7A3Q8WY07 619 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 CLEC4MQ9H2X3 399 aaPredicted RBP10.17□□□□□ -0.78
LINC00871-204ENST00000556886 ZNF576Q9H609 170 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 SRA1Q9HD15 236 aaKnown RBP10.17□□□□□ -0.78
LINC00871-204ENST00000556886 PARP2Q9UGN5 583 aa10.17□□□□□ -0.78
LINC00871-204ENST00000556886 KRBA1A5PL33 1030 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 SOX1O00570 391 aaPredicted RBP10.16□□□□□ -0.78
LINC00871-204ENST00000556886 TM4SF5O14894 197 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 ESRRAP11474 423 aaPredicted RBP10.16□□□□□ -0.78
LINC00871-204ENST00000556886 PIP4K2BP78356 416 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 PCDH1Q08174 1060 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 SHISA2Q6UWI4 295 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 C12orf49Q9H741 205 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 PODXL2Q9NZ53 605 aa10.16□□□□□ -0.78
LINC00871-204ENST00000556886 CCDC9Q9Y3X0 531 aaKnown RBP10.16□□□□□ -0.78
LINC00871-204ENST00000556886 DLL1O00548 723 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 GDF11O95390 407 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 PTPN12Q05209 780 aaKnown RBP10.15□□□□□ -0.78
LINC00871-204ENST00000556886 DTHD1Q6ZMT9 781 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 FAM161BQ96MY7 647 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 SRCIN1Q9C0H9 1055 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 SEC31BQ9NQW1 1179 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 PPP4R2Q9NY27 417 aa10.15□□□□□ -0.78
LINC00871-204ENST00000556886 GIPC1O14908 333 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 SELPP16109 830 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 ZNF423Q2M1K9 1284 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 TMEM151AQ8N4L1 468 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 C3orf58Q8NDZ4 430 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 WNT8BQ93098 351 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 KLHDC7BQ96G42 594 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 FRMD6Q96NE9 622 aa10.14□□□□□ -0.79
LINC00871-204ENST00000556886 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
LINC00871-204ENST00000556886 FOXD4L6Q3SYB3 417 aaPredicted RBP10.13□□□□□ -0.79
LINC00871-204ENST00000556886 FOXD4L3Q6VB84 417 aaPredicted RBP10.13□□□□□ -0.79
LINC00871-204ENST00000556886 KLHL23Q8NBE8 558 aa10.13□□□□□ -0.79
LINC00871-204ENST00000556886 RGS22Q8NE09 1264 aa10.13□□□□□ -0.79
LINC00871-204ENST00000556886 KCNK4Q9NYG8 393 aa10.13□□□□□ -0.79
LINC00871-204ENST00000556886 USP17L7P0C7H9 530 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 EIF4BP23588 611 aaKnown RBP10.12□□□□□ -0.79
LINC00871-204ENST00000556886 GSTT1P30711 240 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 CD68P34810 354 aaPredicted RBP10.12□□□□□ -0.79
LINC00871-204ENST00000556886 DAB2P98082 770 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 C19orf57Q0VDD7 668 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 FAAP100Q0VG06 881 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 PSMD2Q13200 908 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 OSGEPQ9NPF4 335 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 FAM8A1Q9UBU6 413 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 AKAP2Q9Y2D5 859 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 AK5Q9Y6K8 562 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 WRNQ14191 1432 aaPredicted RBP eCLIP10.12□□□□□ -0.79
LINC00871-204ENST00000556886 ABCC8Q09428 1581 aa10.12□□□□□ -0.79
LINC00871-204ENST00000556886 DDX3YO15523 660 aaKnown RBP10.11□□□□□ -0.79
LINC00871-204ENST00000556886 ADAM11O75078 769 aa10.11□□□□□ -0.79
LINC00871-204ENST00000556886 APBA3O96018 575 aa10.11□□□□□ -0.79
LINC00871-204ENST00000556886 B3GALT4O96024 378 aa10.11□□□□□ -0.79
LINC00871-204ENST00000556886 XRCC5P13010 732 aaKnown RBP10.11□□□□□ -0.79
LINC00871-204ENST00000556886 ZNF16P17020 682 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms