RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 ABCA8O94911 1581 aa6.27□□□□□ -1.41
ATXN3-240ENST00000556339 EEA1Q15075 1411 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-240ENST00000556339 SART1O43290 800 aaKnown RBP6.26□□□□□ -1.41
ATXN3-240ENST00000556339 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 PTPRAP18433 802 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 CABP4P57796 275 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 COL13A1Q5TAT6 717 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-240ENST00000556339 GALNT11Q8NCW6 608 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 TTC16Q8NEE8 873 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 CDK11AQ9UQ88 783 aaPredicted RBP6.26□□□□□ -1.41
ATXN3-240ENST00000556339 PHLDB1Q86UU1 1377 aa6.26□□□□□ -1.41
ATXN3-240ENST00000556339 MAGI3Q5TCQ9 1506 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 TNFRSF10BO14763 440 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 FSCN2O14926 492 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 COBLO75128 1261 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 WISP1O95388 367 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 GRIK1P39086 918 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 FAM26DQ5JW98 314 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 MCTP1Q6DN14 999 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 Q6ZS46 218 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 CAPN12Q6ZSI9 719 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 ZNF438Q7Z4V0 828 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 KLHL23Q8NBE8 558 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 UBL7Q96S82 380 aaPredicted RBP6.25□□□□□ -1.41
ATXN3-240ENST00000556339 CFAP43Q8NDM7 1665 aa6.25□□□□□ -1.41
ATXN3-240ENST00000556339 TGFB1P01137 390 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 PCSK2P16519 638 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 IRAK1P51617 712 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 MLECQ14165 292 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 UVSSAQ2YD98 709 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 TMEM164Q5U3C3 297 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 PBX4Q9BYU1 374 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 KCNF1Q9H3M0 494 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 SEC31BQ9NQW1 1179 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 FHOD3Q2V2M9 1422 aa6.24□□□□□ -1.41
ATXN3-240ENST00000556339 PAX4O43316 350 aa6.23□□□□□ -1.41
ATXN3-240ENST00000556339 CYP2E1P05181 493 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-240ENST00000556339 EPHA1P21709 976 aa6.23□□□□□ -1.41
ATXN3-240ENST00000556339 CD97P48960 835 aa6.23□□□□□ -1.41
ATXN3-240ENST00000556339 NUDT16Q96DE0 195 aaKnown RBP6.23□□□□□ -1.41
ATXN3-240ENST00000556339 SH2B1Q9NRF2 756 aaPredicted RBP6.23□□□□□ -1.41
ATXN3-240ENST00000556339 KCNK4Q9NYG8 393 aa6.23□□□□□ -1.41
ATXN3-240ENST00000556339 KANSL3Q9P2N6 904 aa6.23□□□□□ -1.41
ATXN3-240ENST00000556339 RAPGEF6Q8TEU7 1601 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 KIF4AO95239 1232 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 ATG7O95352 703 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 NFIAQ12857 509 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 EFCAB2Q5VUJ9 269 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 PDE12Q6L8Q7 609 aaKnown RBP6.22□□□□□ -1.41
ATXN3-240ENST00000556339 UBASH3BQ8TF42 649 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 SLC7A3Q8WY07 619 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 C7orf69Q9H7B7 122 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 ELP3Q9H9T3 547 aa6.22□□□□□ -1.41
ATXN3-240ENST00000556339 ARAP3Q8WWN8 1544 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 H3BRJ5 948 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 ZBTB39O15060 712 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 DDX3YO15523 660 aaKnown RBP6.21□□□□□ -1.42
ATXN3-240ENST00000556339 GAS2O43903 313 aaKnown RBP6.21□□□□□ -1.42
ATXN3-240ENST00000556339 RPLP1P05386 114 aaKnown RBP6.21□□□□□ -1.42
ATXN3-240ENST00000556339 ATP2B4P23634 1241 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 ARL4DP49703 201 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 NLRP12P59046 1061 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 FDX2Q6P4F2 183 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 KRTAP1-3Q8IUG1 177 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 TRIM42Q8IWZ5 723 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 ARMC10Q8N2F6 343 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 CCDC97Q96F63 343 aaPredicted RBP6.21□□□□□ -1.42
ATXN3-240ENST00000556339 KLHDC7BQ96G42 594 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 MYRFLQ96LU7 910 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 DBNDD2Q9BQY9 259 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 TMEM63CQ9P1W3 806 aa6.21□□□□□ -1.42
ATXN3-240ENST00000556339 AKNAQ7Z591 1439 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 HMX2A2RU54 273 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 CES1P23141 567 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 PIP4K2BP78356 416 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 DNM1Q05193 864 aaKnown RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 ANKRD34AQ69YU3 496 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 INTS5Q6P9B9 1019 aaKnown RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 KIAA1211Q6ZU35 1233 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 ATCAYQ86WG3 371 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 CEP120Q8N960 986 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 FOXD4L4Q8WXT5 416 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 CLP1Q92989 425 aaKnown RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 POP1Q99575 1024 aaKnown RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 DENND4BO75064 1496 aaPredicted RBP6.2□□□□□ -1.42
ATXN3-240ENST00000556339 NEO1Q92859 1461 aa6.2□□□□□ -1.42
ATXN3-240ENST00000556339 SAMD9Q5K651 1589 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 KIF21BO75037 1637 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 BMP3P12645 472 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 GP2P55259 537 aaKnown RBP6.19□□□□□ -1.42
ATXN3-240ENST00000556339 RNF43Q68DV7 783 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 ZDHHC13Q8IUH4 622 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 EDEM1Q92611 657 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 FAM46AQ96IP4 442 aaKnown RBP6.19□□□□□ -1.42
ATXN3-240ENST00000556339 RUSC1Q9BVN2 902 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 RNF208Q9H0X6 261 aa6.19□□□□□ -1.42
ATXN3-240ENST00000556339 SEPT3Q9UH03 358 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms