RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 INCENPQ9NQS7 918 aa17.51■□□□□ 0.39
XRCC3-211ENST00000555055 WWC3Q9ULE0 1092 aa17.51■□□□□ 0.39
XRCC3-211ENST00000555055 MYO5AQ9Y4I1 1855 aaKnown RBP17.51■□□□□ 0.39
XRCC3-211ENST00000555055 GPAA1O43292 621 aa17.5■□□□□ 0.39
XRCC3-211ENST00000555055 C3orf67Q6ZVT6 689 aa17.5■□□□□ 0.39
XRCC3-211ENST00000555055 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
XRCC3-211ENST00000555055 MPNDQ8N594 471 aa17.5■□□□□ 0.39
XRCC3-211ENST00000555055 KDM4AO75164 1064 aa17.5■□□□□ 0.39
XRCC3-211ENST00000555055 RFX7Q2KHR2 1363 aa17.5■□□□□ 0.39
XRCC3-211ENST00000555055 LTBP4Q8N2S1 1624 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 ERVV-1B6SEH8 477 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 MYRIPQ8NFW9 859 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.49■□□□□ 0.39
XRCC3-211ENST00000555055 APPP05067 770 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.392e-6■■■■□ 26.2
XRCC3-211ENST00000555055 UTP14AQ9BVJ6 771 aaKnown RBP17.49■□□□□ 0.39
XRCC3-211ENST00000555055 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
XRCC3-211ENST00000555055 LAMA4Q16363 1823 aa17.49■□□□□ 0.39
XRCC3-211ENST00000555055 CTDNEP1O95476 244 aa17.48■□□□□ 0.39
XRCC3-211ENST00000555055 HMGN5P82970 282 aaKnown RBP17.48■□□□□ 0.39
XRCC3-211ENST00000555055 GIMAP6Q6P9H5 292 aa17.48■□□□□ 0.39
XRCC3-211ENST00000555055 LINC00116Q8NCU8 138 aa17.48■□□□□ 0.39
XRCC3-211ENST00000555055 COL22A1Q8NFW1 1626 aaPredicted RBP17.48■□□□□ 0.39
XRCC3-211ENST00000555055 COL4A1P02462 1669 aa17.48■□□□□ 0.39
XRCC3-211ENST00000555055 BCAMP50895 628 aa17.48■□□□□ 0.39
XRCC3-211ENST00000555055 TMEM87AQ8NBN3 555 aa17.47■□□□□ 0.39
XRCC3-211ENST00000555055 ZNF532Q9HCE3 1301 aa17.47■□□□□ 0.39
XRCC3-211ENST00000555055 UBAP1LF5GYI3 381 aa17.47■□□□□ 0.39
XRCC3-211ENST00000555055 EXOSC10Q01780 885 aaKnown RBP17.47■□□□□ 0.39
XRCC3-211ENST00000555055 APPBP2Q92624 585 aa17.47■□□□□ 0.39
XRCC3-211ENST00000555055 MYH3P11055 1940 aa17.47■□□□□ 0.39
XRCC3-211ENST00000555055 RXRAP19793 462 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 RASGRF1Q13972 1273 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 CAMK4Q16566 473 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 SLC51AQ86UW1 340 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 CCDC94Q9BW85 323 aaPredicted RBP17.46■□□□□ 0.39
XRCC3-211ENST00000555055 GJB4Q9NTQ9 266 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 UBE2HP62256 183 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.46■□□□□ 0.39
XRCC3-211ENST00000555055 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 FBXO3Q9UK99 471 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 THRAP3Q9Y2W1 955 aaKnown RBP17.46■□□□□ 0.39
XRCC3-211ENST00000555055 ATP6V1DQ9Y5K8 247 aa17.46■□□□□ 0.39
XRCC3-211ENST00000555055 WNK3Q9BYP7 1800 aa17.46■□□□□ 0.38
XRCC3-211ENST00000555055 TAF1P21675 1872 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 PTPDC1A2A3K4 754 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 H3BQV1 296 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 NTSR2O95665 410 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 UTP14CQ5TAP6 766 aaKnown RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 IFFO2Q5TF58 517 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 AMIGO3Q86WK7 504 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 AKAP11Q9UKA4 1901 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 ANKRD36CQ5JPF3 1778 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 NRAPQ86VF7 1730 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 ADD2P35612 726 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 PUM3Q15397 648 aaKnown RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 ERFEQ4G0M1 354 aa17.45■□□□□ 0.38
XRCC3-211ENST00000555055 NSUN7Q8NE18 718 aaKnown RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 CDCA7Q9BWT1 371 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 ALDH8A1Q9H2A2 487 aaPredicted RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 SRP68Q9UHB9 627 aaKnown RBP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
XRCC3-211ENST00000555055 LETM1O95202 739 aaPredicted RBP17.44■□□□□ 0.38
XRCC3-211ENST00000555055 LIG1P18858 919 aa17.44■□□□□ 0.38
XRCC3-211ENST00000555055 NBPF3Q9H094 633 aa17.44■□□□□ 0.38
XRCC3-211ENST00000555055 NWD2Q9ULI1 1742 aa17.44■□□□□ 0.38
XRCC3-211ENST00000555055 PDE6AP16499 860 aa17.44■□□□□ 0.38
XRCC3-211ENST00000555055 PDIA3P30101 505 aaKnown RBP17.44■□□□□ 0.38
XRCC3-211ENST00000555055 IMMTQ16891 758 aaKnown RBP17.44■□□□□ 0.38
XRCC3-211ENST00000555055 MAGEB6Q8N7X4 407 aa17.44■□□□□ 0.38
XRCC3-211ENST00000555055 TOM1O60784 492 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 PTMAP06454 111 aaKnown RBP17.43■□□□□ 0.38
XRCC3-211ENST00000555055 TBC1D10CQ8IV04 446 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 LPIN2Q92539 896 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 PRC1O43663 620 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 FGFR2P21802 821 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 ANTXR2P58335 489 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 KRT85P78386 507 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 MIGA1Q8NAN2 632 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
XRCC3-211ENST00000555055 ZNF213O14771 459 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 PRKAB2O43741 272 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 PFKFB2O60825 505 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 PDCP20941 246 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 CCDC144CPQ8IYA2 1237 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 SPTLC3Q9NUV7 552 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 ZFYP08048 801 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-211ENST00000555055 CHRNDQ07001 517 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.42■□□□□ 0.38
XRCC3-211ENST00000555055 ARMT1Q9H993 441 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 SPEF2Q9C093 1822 aa17.42■□□□□ 0.38
XRCC3-211ENST00000555055 SMIM22K7EJ46 135 aa17.41■□□□□ 0.38
XRCC3-211ENST00000555055 HMGB1P09429 215 aaKnown RBP17.41■□□□□ 0.38
XRCC3-211ENST00000555055 GYG1P46976 350 aa17.41■□□□□ 0.38
XRCC3-211ENST00000555055 CCDC183Q5T5S1 534 aa17.41■□□□□ 0.38
XRCC3-211ENST00000555055 SPATA32Q96LK8 384 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms