RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 THBS1P07996 1170 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 HSPA8P11142 646 aaKnown RBP6.49□□□□□ -1.37
ATXN3-231ENST00000554994 BMP4P12644 408 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 CHRNA4P43681 627 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 ZMYM1Q5SVZ6 1142 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 TMC1Q8TDI8 760 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 SYTL4Q96C24 671 aaPredicted RBP6.49□□□□□ -1.37
ATXN3-231ENST00000554994 SLC24A3Q9HC58 644 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 RAB6BQ9NRW1 208 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 PKD1L3Q7Z443 1732 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 C10orf71Q711Q0 1435 aa6.49□□□□□ -1.37
ATXN3-231ENST00000554994 PXDNLA1KZ92 1463 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 EIF3AQ14152 1382 aaKnown RBP6.48□□□□□ -1.37
ATXN3-231ENST00000554994 SPATA31C2B4DYI2 1134 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 USP17L8P0C7I0 530 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 CLN3Q13286 438 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 LINC00114Q6XXX2 140 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 CYP2U1Q7Z449 544 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 GOLGA6L1Q8N7Z2 621 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 RNF181Q9P0P0 153 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 GGA1Q9UJY5 639 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 CCNL1Q9UK58 526 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-231ENST00000554994 ABCC6O95255 1503 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 PPIP5K1Q6PFW1 1433 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 TNRC6CQ9HCJ0 1690 aaKnown RBP6.48□□□□□ -1.37
ATXN3-231ENST00000554994 EVC2Q86UK5 1308 aa6.48□□□□□ -1.37
ATXN3-231ENST00000554994 TNRC18O15417 2968 aaPredicted RBP6.48□□□□□ -1.37
ATXN3-231ENST00000554994 ST20-MTHFSA0A0A6YYL1 179 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 A0A0G2JLW4 131 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 SCO2A0A1W2PP80 73 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 GNB5O14775 395 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 ITGB7P26010 798 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 SCTRP47872 440 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 ERVK-9P63128 1117 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 SKIV2LQ15477 1246 aaKnown RBP6.47□□□□□ -1.37
ATXN3-231ENST00000554994 NLRP13Q86W25 1043 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 CARD10Q9BWT7 1032 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 RUBCNLQ9H714 662 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 CABP1Q9NZU7 370 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 ACEP12821 1306 aa6.47□□□□□ -1.37
ATXN3-231ENST00000554994 CNTNAP1P78357 1384 aa6.46□□□□□ -1.37
ATXN3-231ENST00000554994 PIK3R2O00459 728 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 WDR44Q5JSH3 913 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 AMIGO3Q86WK7 504 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 PGBD3Q8N328 593 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 ABHD17AQ96GS6 310 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 TIMELESSQ9UNS1 1208 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 COL18A1P39060 1754 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 N4BP2Q86UW6 1770 aaPredicted RBP6.46□□□□□ -1.38
ATXN3-231ENST00000554994 CLSPNQ9HAW4 1339 aa6.46□□□□□ -1.38
ATXN3-231ENST00000554994 RGPD5Q99666 1765 aa6.45□□□□□ -1.38
ATXN3-231ENST00000554994 C2CD2LO14523 706 aa6.45□□□□□ -1.38
ATXN3-231ENST00000554994 HOXB4P17483 251 aaPredicted RBP6.45□□□□□ -1.38
ATXN3-231ENST00000554994 PCDHB11Q9Y5F2 797 aa6.45□□□□□ -1.38
ATXN3-231ENST00000554994 CPSF1Q10570 1443 aaKnown RBP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 ZBBXA8MT70 800 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 DPEP1P16444 411 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 SOX10P56693 466 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 CTBSQ01459 385 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 SLCO4C1Q6ZQN7 724 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 DDX54Q8TDD1 881 aaKnown RBP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 BTBD6Q96KE9 485 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 NOP53Q9NZM5 478 aaKnown RBP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 KIAA1551Q9HCM1 1747 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 POLR3AO14802 1390 aaPredicted RBP6.44□□□□□ -1.38
ATXN3-231ENST00000554994 CCDC7Q96M83 1385 aa6.44□□□□□ -1.38
ATXN3-231ENST00000554994 USP54Q70EL1 1684 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 LY75O60449 1722 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 A0A1B0GTH6 734 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 NEURL1BA8MQ27 555 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 VEGFAP15692 232 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-231ENST00000554994 FGFR3P22607 806 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 GTF2E1P29083 439 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-231ENST00000554994 TMF1P82094 1093 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 CENPCQ03188 943 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 TPRNQ4KMQ1 711 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 RNF20Q5VTR2 975 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 CNKSR1Q969H4 720 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 ZSCAN10Q96SZ4 725 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-231ENST00000554994 MCOLN1Q9GZU1 580 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 SLC12A5Q9H2X9 1139 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 OSBPL3Q9H4L5 887 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 NLRP2Q9NX02 1062 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 ATXN7L1Q9ULK2 861 aaPredicted RBP6.43□□□□□ -1.38
ATXN3-231ENST00000554994 NSD2O96028 1365 aa6.43□□□□□ -1.38
ATXN3-231ENST00000554994 SLIT3O75094 1523 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 DLL1O00548 723 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 EPXP11678 715 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 IL2RBP14784 551 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 GATA4P43694 442 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 EIF4G2P78344 907 aaKnown RBP eCLIP6.42□□□□□ -1.38
ATXN3-231ENST00000554994 SH3D19Q5HYK7 790 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 EFHC2Q5JST6 749 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 TMEM214Q6NUQ4 689 aaKnown RBP6.42□□□□□ -1.38
ATXN3-231ENST00000554994 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
ATXN3-231ENST00000554994 C5P01031 1676 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 USP47Q96K76 1375 aa6.42□□□□□ -1.38
ATXN3-231ENST00000554994 DOT1LQ8TEK3 1739 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms