RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 PDCP20941 246 aa18.1■□□□□ 0.49
SYNE3-203ENST00000554873 ZRSR1Q15695 479 aaKnown RBP18.1■□□□□ 0.49
SYNE3-203ENST00000554873 BLOC1S2Q6QNY1 142 aa18.1■□□□□ 0.49
SYNE3-203ENST00000554873 TFIP11Q9UBB9 837 aaKnown RBP18.1■□□□□ 0.49
SYNE3-203ENST00000554873 NBPF11Q86T75 865 aa18.1■□□□□ 0.49
SYNE3-203ENST00000554873 DHX40Q8IX18 779 aaKnown RBP18.1■□□□□ 0.49
SYNE3-203ENST00000554873 SFPQP23246 707 aaKnown RBP eCLIP18.09■□□□□ 0.49
SYNE3-203ENST00000554873 RPS6KB1P23443 525 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 TOB2Q14106 344 aaPredicted RBP18.09■□□□□ 0.49
SYNE3-203ENST00000554873 THEMISQ8N1K5 641 aaPredicted RBP18.09■□□□□ 0.49
SYNE3-203ENST00000554873 LINS1Q8NG48 757 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 VPS18Q9P253 973 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 CCDC196A0A1B0GTZ2 297 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 MAP2K7O14733 419 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 JAKMIP3Q5VZ66 844 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 LARP1Q6PKG0 1096 aaKnown RBP18.09■□□□□ 0.49
SYNE3-203ENST00000554873 EPC1Q9H2F5 836 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 ADGRL3Q9HAR2 1447 aa18.09■□□□□ 0.49
SYNE3-203ENST00000554873 CTAGE5O15320 804 aa18.08■□□□□ 0.49
SYNE3-203ENST00000554873 FSD1Q9BTV5 496 aa18.08■□□□□ 0.49
SYNE3-203ENST00000554873 SIL1Q9H173 461 aa18.08■□□□□ 0.49
SYNE3-203ENST00000554873 PARP3Q9Y6F1 533 aa18.08■□□□□ 0.49
SYNE3-203ENST00000554873 NPHP4O75161 1426 aaPredicted RBP18.08■□□□□ 0.49
SYNE3-203ENST00000554873 ANKRD1Q15327 319 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 LONRF2Q1L5Z9 754 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 ARMCX5Q6P1M9 558 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 TRIM65Q6PJ69 517 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 PGBD1Q96JS3 809 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 AIMP1Q12904 312 aaKnown RBP18.08■□□□□ 0.48
SYNE3-203ENST00000554873 PARD6BQ9BYG5 372 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 ALDH8A1Q9H2A2 487 aaPredicted RBP18.08■□□□□ 0.48
SYNE3-203ENST00000554873 UTYO14607 1347 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 HEG1Q9ULI3 1381 aa18.08■□□□□ 0.48
SYNE3-203ENST00000554873 TDO2P48775 406 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 STK3Q13188 491 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 TADA2BQ86TJ2 420 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 RPAINQ86UA6 219 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 ZNF589Q86UQ0 364 aaPredicted RBP18.07■□□□□ 0.48
SYNE3-203ENST00000554873 KLHDC4Q8TBB5 520 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
SYNE3-203ENST00000554873 AMOTQ4VCS5 1084 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 RABGGTAQ92696 567 aa18.07■□□□□ 0.48
SYNE3-203ENST00000554873 RGPD2P0DJD1 1756 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 A0A087WUV0 522 aaPredicted RBP18.06■□□□□ 0.48
SYNE3-203ENST00000554873 CCDC151A5D8V7 595 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 APOBRQ0VD83 1088 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 GNL2Q13823 731 aaKnown RBP18.06■□□□□ 0.48
SYNE3-203ENST00000554873 RSRC2Q7L4I2 434 aaKnown RBP18.06■□□□□ 0.48
SYNE3-203ENST00000554873 ANO10Q9NW15 660 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 NFAT5O94916 1531 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 MED23Q9ULK4 1368 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 KIF13AQ9H1H9 1805 aa18.06■□□□□ 0.48
SYNE3-203ENST00000554873 LMO7Q8WWI1 1683 aa18.05■□□□□ 0.48
SYNE3-203ENST00000554873 BRD3Q15059 726 aa18.05■□□□□ 0.48
SYNE3-203ENST00000554873 MSL3Q8N5Y2 521 aaKnown RBP18.05■□□□□ 0.48
SYNE3-203ENST00000554873 EDC3Q96F86 508 aaKnown RBP18.05■□□□□ 0.48
SYNE3-203ENST00000554873 PATL2C9JE40 543 aaKnown RBP18.04■□□□□ 0.48
SYNE3-203ENST00000554873 TAF5LO75529 589 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 IGKV5-2P06315 115 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 CEP57L1Q8IYX8 460 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 RBM33Q96EV2 1170 aaKnown RBP18.04■□□□□ 0.48
SYNE3-203ENST00000554873 PXDNQ92626 1479 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 FANCGO15287 622 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 PSME1Q06323 249 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 PDIA6Q15084 440 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 LRRC31Q6UY01 552 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 TMC6Q7Z403 805 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 EGFL6Q8IUX8 553 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 KCNH5Q8NCM2 988 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 PDE11AQ9HCR9 933 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 DDX21Q9NR30 783 aaKnown RBP eCLIP18.04■□□□□ 0.48
SYNE3-203ENST00000554873 DDX58O95786 925 aaKnown RBP18.04■□□□□ 0.48
SYNE3-203ENST00000554873 AOPEPQ8N6M6 819 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 MPHOSPH8Q99549 860 aa18.04■□□□□ 0.48
SYNE3-203ENST00000554873 JAK2O60674 1132 aa18.03■□□□□ 0.48
SYNE3-203ENST00000554873 EIF3JO75822 258 aaKnown RBP18.03■□□□□ 0.48
SYNE3-203ENST00000554873 PPP2R3AQ06190 1150 aa18.03■□□□□ 0.48
SYNE3-203ENST00000554873 FAM107BQ9H098 131 aa18.03■□□□□ 0.48
SYNE3-203ENST00000554873 NAT10Q9H0A0 1025 aaKnown RBP18.03■□□□□ 0.48
SYNE3-203ENST00000554873 HMG20BQ9P0W2 317 aa18.03■□□□□ 0.48
SYNE3-203ENST00000554873 ANKRD65E5RJM6 399 aa18.02■□□□□ 0.48
SYNE3-203ENST00000554873 EIF5P55010 431 aaKnown RBP18.02■□□□□ 0.48
SYNE3-203ENST00000554873 MAP3K9P80192 1104 aa18.02■□□□□ 0.48
SYNE3-203ENST00000554873 EPHA10Q5JZY3 1008 aa18.02■□□□□ 0.48
SYNE3-203ENST00000554873 PPFIA4O75335 1185 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 TXLNAP40222 546 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 DNAJC21Q5F1R6 531 aaKnown RBP18.02■□□□□ 0.47
SYNE3-203ENST00000554873 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 RIC3Q7Z5B4 369 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 MICALL1Q8N3F8 863 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 HNRNPLLQ8WVV9 542 aaKnown RBP18.02■□□□□ 0.47
SYNE3-203ENST00000554873 GOLGA1Q92805 767 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 JCADQ9P266 1359 aa18.02■□□□□ 0.47
SYNE3-203ENST00000554873 TRDNQ13061 729 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 SAMD1Q6SPF0 538 aaPredicted RBP18.01■□□□□ 0.47
SYNE3-203ENST00000554873 HDXQ7Z353 690 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 AKAP2Q9Y2D5 859 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 COL15A1P39059 1388 aa18.01■□□□□ 0.47
SYNE3-203ENST00000554873 CCDC189A1A4V9 331 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms