RNA–Protein interactions for RNA: ENST00000554546.5

NUMB-212, Transcript of NUMB, endocytic adaptor protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NUMB, Length 3,607 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-212ENST00000554546 CCDC13Q8IYE1 715 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 GDAP1L1Q96MZ0 367 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 BATF3Q9NR55 127 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 EIF3HO15372 352 aaKnown RBP eCLIP12.88□□□□□ -0.35
NUMB-212ENST00000554546 CUTAO60888 179 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 SCNN1BP51168 640 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 PDIA5Q14554 519 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 TRIM42Q8IWZ5 723 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 RGL1Q9NZL6 768 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 PPP2R2CQ9Y2T4 447 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
NUMB-212ENST00000554546 GOLGA6CA6NDK9 693 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 GOLGA6DP0CG33 693 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 CSB-PGBD3P0DP91 1061 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 CD151P48509 253 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 CEBPZQ03701 1054 aaKnown RBP12.88□□□□□ -0.35
NUMB-212ENST00000554546 DBN1Q16643 649 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 TCP11Q8WWU5 503 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 GOLGA6AQ9NYA3 693 aa12.88□□□□□ -0.35
NUMB-212ENST00000554546 LRRIQ1Q96JM4 1722 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 LARGE1O95461 756 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 MYL1P05976 194 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 SETDB1Q15047 1291 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 GNPTABQ3T906 1256 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 RRP12Q5JTH9 1297 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 RUFY3Q7L099 469 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 CEP57L1Q8IYX8 460 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 MSANTD4Q8NCY6 345 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 VCPKMTQ9H867 229 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 TPX2Q9ULW0 747 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 MYBL1P10243 752 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 SF3B2Q13435 895 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 KARSQ15046 597 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 MIS18BP1Q6P0N0 1132 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 RBM12BQ8IXT5 1001 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 RILPL2Q969X0 211 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 TBC1D31Q96DN5 1066 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 BICD1Q96G01 975 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 WDR62O43379 1518 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 ZBED6P86452 979 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 CCDC178Q5BJE1 867 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 LARP1BQ659C4 914 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 MMTAG2Q9BU76 263 aaKnown RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 SCAND2PQ9GZW5 306 aaPredicted RBP12.87□□□□□ -0.35
NUMB-212ENST00000554546 TRPM1Q7Z4N2 1603 aa12.87□□□□□ -0.35
NUMB-212ENST00000554546 MAGEA10P43363 369 aaPredicted RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 PPFIA1Q13136 1202 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 CYB5D1Q6P9G0 228 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 BZW1Q7L1Q6 419 aaKnown RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 CDC37L1Q7L3B6 337 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 FAM81AQ8TBF8 368 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 LEO1Q8WVC0 666 aaPredicted RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 PCDHGC5Q9Y5F6 944 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 CLTCL1P53675 1640 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 ABCC11Q96J66 1382 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 CPA1P15085 419 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 PAPOLAP51003 745 aaKnown RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 CWF19L1Q69YN2 538 aaKnown RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 NSMCE1Q8WV22 266 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 KIFC2Q96AC6 838 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 FAM163AQ96GL9 167 aaPredicted RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 PGBD1Q96JS3 809 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 SLC8A1P32418 973 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 GGCXP38435 758 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 KIF4BQ2VIQ3 1234 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 HSP90AB2PQ58FF8 381 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 AKNAD1Q5T1N1 836 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.86□□□□□ -0.35
NUMB-212ENST00000554546 ARHGAP22Q7Z5H3 698 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.86□□□□□ -0.351e-6■■■■■ 77.5
NUMB-212ENST00000554546 ANO10Q9NW15 660 aa12.86□□□□□ -0.35
NUMB-212ENST00000554546 EVC2Q86UK5 1308 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 MYO1EQ12965 1108 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 CCDC50Q8IVM0 306 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 TRIM4Q9C037 500 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 MMADHCQ9H3L0 296 aaPredicted RBP12.85□□□□□ -0.35
NUMB-212ENST00000554546 PAPOLBQ9NRJ5 636 aaKnown RBP12.85□□□□□ -0.35
NUMB-212ENST00000554546 RIPOR2Q9Y4F9 1068 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 AHCYL1O43865 530 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 TFRCP02786 760 aaKnown RBP12.85□□□□□ -0.35
NUMB-212ENST00000554546 SPAG5Q96R06 1193 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 CARD14Q9BXL6 1004 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 TRPC6Q9Y210 931 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 FESP07332 822 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 AARSP49588 968 aaKnown RBP eCLIP12.85□□□□□ -0.358e-6■□□□□ 10.3
NUMB-212ENST00000554546 HDGFP51858 240 aaKnown RBP12.85□□□□□ -0.35
NUMB-212ENST00000554546 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
NUMB-212ENST00000554546 GRIN2DO15399 1336 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 A0A1B0GVG6 124 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 STIM1Q13586 685 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 LRRC23Q53EV4 343 aaPredicted RBP12.84□□□□□ -0.35
NUMB-212ENST00000554546 MICALCLQ6ZW33 695 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 OSBPL9Q96SU4 736 aa12.84□□□□□ -0.35
NUMB-212ENST00000554546 ZNF777Q9ULD5 760 aaPredicted RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms