RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 KLHL23Q8NBE8 558 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 UTP4Q969X6 686 aaKnown RBP6.8□□□□□ -1.32
ATXN3-227ENST00000554491 PBXIP1Q96AQ6 731 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 FAM46AQ96IP4 442 aaKnown RBP6.8□□□□□ -1.32
ATXN3-227ENST00000554491 CEP41Q9BYV8 373 aa6.8□□□□□ -1.32
ATXN3-227ENST00000554491 ABCA5Q8WWZ7 1642 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 SOGA1O94964 1423 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 HMX2A2RU54 273 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 A6NHS1 94 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 TRPA1O75762 1119 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-227ENST00000554491 MCTP1Q6DN14 999 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 FAM9AQ8IZU1 332 aaPredicted RBP6.79□□□□□ -1.32
ATXN3-227ENST00000554491 C1orf127Q8N9H9 656 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 HHIPQ96QV1 700 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 ADAM19Q9H013 955 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 C7orf69Q9H7B7 122 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 SEC31BQ9NQW1 1179 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 CCDC88BA6NC98 1476 aa6.79□□□□□ -1.32
ATXN3-227ENST00000554491 ADAMTS12P58397 1594 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 NFKBIEO00221 500 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 DNM1Q05193 864 aaKnown RBP6.78□□□□□ -1.32
ATXN3-227ENST00000554491 LCE3BQ5TA77 95 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 ZDHHC13Q8IUH4 622 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 EDEM1Q92611 657 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 MYRFLQ96LU7 910 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 ZMYND15Q9H091 742 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 GGNBP2Q9H3C7 697 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 SALL4Q9UJQ4 1053 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 GRIN2AQ12879 1464 aa6.78□□□□□ -1.32
ATXN3-227ENST00000554491 H3BRJ5 948 aa6.77□□□□□ -1.33
ATXN3-227ENST00000554491 GSC2O15499 205 aa6.77□□□□□ -1.33
ATXN3-227ENST00000554491 NFIAQ12857 509 aa6.77□□□□□ -1.33
ATXN3-227ENST00000554491 HGSNATQ68CP4 663 aa6.77□□□□□ -1.33
ATXN3-227ENST00000554491 DZANK1Q9NVP4 752 aa6.77□□□□□ -1.33
ATXN3-227ENST00000554491 PPRC1Q5VV67 1664 aaKnown RBP6.77□□□□□ -1.33
ATXN3-227ENST00000554491 NUP160Q12769 1436 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 ADCY10Q96PN6 1610 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 KIAA1324LA8MWY0 1029 aaPredicted RBP6.76□□□□□ -1.33
ATXN3-227ENST00000554491 ADAMTS4O75173 837 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 CES1P23141 567 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 PREPP48147 710 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 NLRP12P59046 1061 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 UVSSAQ2YD98 709 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 KRTAP19-1Q8IUB9 90 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 HELQQ8TDG4 1101 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 CHRDQ9H2X0 955 aa6.76□□□□□ -1.33
ATXN3-227ENST00000554491 FAM177BA6PVY3 158 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 PDE2AO00408 941 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-227ENST00000554491 COBLO75128 1261 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 PDGFAP04085 211 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 PIP4K2BP78356 416 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 C8orf34Q49A92 452 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 RNF43Q68DV7 783 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 XKR5Q6UX68 686 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 FAM20CQ8IXL6 584 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 SLC7A3Q8WY07 619 aa6.75□□□□□ -1.33
ATXN3-227ENST00000554491 CCDC97Q96F63 343 aaPredicted RBP6.75□□□□□ -1.33
ATXN3-227ENST00000554491 OAS3Q9Y6K5 1087 aaKnown RBP6.75□□□□□ -1.33
ATXN3-227ENST00000554491 PRR19A6NJB7 356 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 BMP3P12645 472 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 MPSTP25325 297 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 CABP4P57796 275 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 MTMR3Q13615 1198 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 WNT8BQ93098 351 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 SOX13Q9UN79 622 aa6.74□□□□□ -1.33
ATXN3-227ENST00000554491 COL17A1Q9UMD9 1497 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-227ENST00000554491 TOP2BQ02880 1626 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 CUX1P39880 1505 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 ARID3CA6NKF2 412 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 EIF1AXP47813 144 aaKnown RBP6.73□□□□□ -1.33
ATXN3-227ENST00000554491 NOM1Q5C9Z4 860 aaKnown RBP6.73□□□□□ -1.33
ATXN3-227ENST00000554491 ANKRD34AQ69YU3 496 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-227ENST00000554491 BEND4Q6ZU67 534 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 GTF3C2Q8WUA4 911 aaPredicted RBP6.73□□□□□ -1.33
ATXN3-227ENST00000554491 FAM83CQ9BQN1 747 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 KCNF1Q9H3M0 494 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 OSGEPQ9NPF4 335 aa6.73□□□□□ -1.33
ATXN3-227ENST00000554491 SART1O43290 800 aaKnown RBP6.72□□□□□ -1.33
ATXN3-227ENST00000554491 RPLP1P05386 114 aaKnown RBP6.72□□□□□ -1.33
ATXN3-227ENST00000554491 SPINK2P20155 84 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 MZF1P28698 734 aaPredicted RBP6.72□□□□□ -1.33
ATXN3-227ENST00000554491 GP2P55259 537 aaKnown RBP6.72□□□□□ -1.33
ATXN3-227ENST00000554491 CLEC10AQ8IUN9 316 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 SHKBP1Q8TBC3 707 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 RUSC1Q9BVN2 902 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 RNF208Q9H0X6 261 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 SERPINA10Q9UK55 444 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 SPATA31D1Q6ZQQ2 1576 aa6.72□□□□□ -1.33
ATXN3-227ENST00000554491 SOX1O00570 391 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-227ENST00000554491 EREGO14944 169 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 PCSK2P16519 638 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 VN1R5Q7Z5H4 357 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 TMEM102Q8N9M5 508 aaPredicted RBP6.71□□□□□ -1.34
ATXN3-227ENST00000554491 NXPE3Q969Y0 559 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 OSMRQ99650 979 aa6.71□□□□□ -1.34
ATXN3-227ENST00000554491 ZKSCAN3Q9BRR0 538 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms