RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 TXNDC11Q6PKC3 985 aa8.76□□□□□ -1.01
SCFD1-211ENST00000554437 GLIS3Q8NEA6 775 aa8.76□□□□□ -1.01
SCFD1-211ENST00000554437 ABCB6Q9NP58 842 aa8.76□□□□□ -1.01
SCFD1-211ENST00000554437 RNF19AQ9NV58 838 aa8.76□□□□□ -1.01
SCFD1-211ENST00000554437 PARP2Q9UGN5 583 aa8.76□□□□□ -1.01
SCFD1-211ENST00000554437 H3BRJ5 948 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 GIPC1O14908 333 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 GNA15P30679 374 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 FCGRTP55899 365 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 ILDR2Q71H61 639 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 DTWD1Q8N5C7 304 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 RGS22Q8NE09 1264 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 FRMD6Q96NE9 622 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 PSMG3-AS1Q96PY0 264 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 OSBPL7Q9BZF2 842 aa8.75□□□□□ -1.01
SCFD1-211ENST00000554437 COL8A1P27658 744 aa8.74□□□□□ -1.01
SCFD1-211ENST00000554437 DTHD1Q6ZMT9 781 aa8.74□□□□□ -1.01
SCFD1-211ENST00000554437 VN1R5Q7Z5H4 357 aa8.74□□□□□ -1.01
SCFD1-211ENST00000554437 FMR1NBQ8N0W7 255 aaPredicted RBP8.74□□□□□ -1.01
SCFD1-211ENST00000554437 ITPKAP23677 461 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 PSMD2Q13200 908 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 IKBKEQ14164 716 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 SETDB1Q15047 1291 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 FOXD4L4Q8WXT5 416 aaPredicted RBP8.73□□□□□ -1.01
SCFD1-211ENST00000554437 SRCIN1Q9C0H9 1055 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 C12orf49Q9H741 205 aa8.73□□□□□ -1.01
SCFD1-211ENST00000554437 FSCN2O14926 492 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 DEAF1O75398 565 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-211ENST00000554437 EIF4BP23588 611 aaKnown RBP8.72□□□□□ -1.01
SCFD1-211ENST00000554437 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 MAP4K3Q8IVH8 894 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 FAM161BQ96MY7 647 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 CARD10Q9BWT7 1032 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
SCFD1-211ENST00000554437 SRA1Q9HD15 236 aaKnown RBP8.72□□□□□ -1.01
SCFD1-211ENST00000554437 AKAP2Q9Y2D5 859 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 AK5Q9Y6K8 562 aa8.72□□□□□ -1.01
SCFD1-211ENST00000554437 SPATA31C1P0DKV0 1188 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 XRCC5P13010 732 aaKnown RBP8.71□□□□□ -1.02
SCFD1-211ENST00000554437 ZNF16P17020 682 aaPredicted RBP8.71□□□□□ -1.02
SCFD1-211ENST00000554437 GSTT1P30711 240 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 ARL4DP49703 201 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 PIP4K2BP78356 416 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 DAB2P98082 770 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
SCFD1-211ENST00000554437 PCDH1Q08174 1060 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 ZNF576Q9H609 170 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 SEC31BQ9NQW1 1179 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 FAM8A1Q9UBU6 413 aa8.71□□□□□ -1.02
SCFD1-211ENST00000554437 SOX1O00570 391 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-211ENST00000554437 ESRRAP11474 423 aaPredicted RBP8.7□□□□□ -1.02
SCFD1-211ENST00000554437 ELNP15502 786 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 GRIK4Q16099 956 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 ALYREFQ86V81 257 aaKnown RBP8.7□□□□□ -1.02
SCFD1-211ENST00000554437 WNT8BQ93098 351 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 BCL11AQ9H165 835 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 ZFYVE1Q9HBF4 777 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 MRS2Q9HD23 443 aa8.7□□□□□ -1.02
SCFD1-211ENST00000554437 USP17L7P0C7H9 530 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 C19orf57Q0VDD7 668 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 ZNF423Q2M1K9 1284 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 HGSNATQ68CP4 663 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 TMC4Q7Z404 712 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 KLHL23Q8NBE8 558 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 GALNT11Q8NCW6 608 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 DCAF11Q8TEB1 546 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 KLHDC7BQ96G42 594 aa8.69□□□□□ -1.02
SCFD1-211ENST00000554437 RBM47A0AV96 593 aaKnown RBP8.68□□□□□ -1.02
SCFD1-211ENST00000554437 MSTNO14793 375 aa8.68□□□□□ -1.02
SCFD1-211ENST00000554437 SORBS3O60504 671 aa8.68□□□□□ -1.02
SCFD1-211ENST00000554437 APBA3O96018 575 aa8.68□□□□□ -1.02
SCFD1-211ENST00000554437 CD68P34810 354 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-211ENST00000554437 RPS26P11Q5JNZ5 115 aaPredicted RBP8.68□□□□□ -1.02
SCFD1-211ENST00000554437 C3orf58Q8NDZ4 430 aa8.68□□□□□ -1.02
SCFD1-211ENST00000554437 OSGEPQ9NPF4 335 aa8.68□□□□□ -1.02
SCFD1-211ENST00000554437 DLL1O00548 723 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 ITGB2P05107 769 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 ITGAEP38570 1179 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 ZNF157P51786 506 aaPredicted RBP8.67□□□□□ -1.02
SCFD1-211ENST00000554437 PLA2G4EQ3MJ16 856 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 DCAF5Q96JK2 942 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 SPOCK3Q9BQ16 436 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 VTI1BQ9UEU0 232 aa8.67□□□□□ -1.02
SCFD1-211ENST00000554437 B3GALT4O96024 378 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 GSTM4Q03013 218 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 FAAP100Q0VG06 881 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 IGF2-ASQ6U949 168 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 KRTAP1-3Q8IUG1 177 aa8.66□□□□□ -1.02
SCFD1-211ENST00000554437 SOX17Q9H6I2 414 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-211ENST00000554437 GPN3Q9UHW5 284 aaPredicted RBP8.66□□□□□ -1.02
SCFD1-211ENST00000554437 KRBA1A5PL33 1030 aa8.65□□□□□ -1.02
SCFD1-211ENST00000554437 DDX3YO15523 660 aaKnown RBP8.65□□□□□ -1.02
SCFD1-211ENST00000554437 NLRP12P59046 1061 aa8.65□□□□□ -1.02
SCFD1-211ENST00000554437 FOXD4L6Q3SYB3 417 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-211ENST00000554437 FOXD4L3Q6VB84 417 aaPredicted RBP8.65□□□□□ -1.02
SCFD1-211ENST00000554437 DDX54Q8TDD1 881 aaKnown RBP8.65□□□□□ -1.02
SCFD1-211ENST00000554437 NACC1Q96RE7 527 aa8.65□□□□□ -1.02
SCFD1-211ENST00000554437 KCNK4Q9NYG8 393 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms