RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 EGFRP00533 1210 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 USP17L8P0C7I0 530 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 TRIM27P14373 513 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 IL1R1P14778 569 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 RFX5P48382 616 aaPredicted RBP9.43□□□□□ -0.9
LINC00640-201ENST00000554409 KIF4BQ2VIQ3 1234 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 TBC1D10BQ4KMP7 808 aaPredicted RBP9.43□□□□□ -0.9
LINC00640-201ENST00000554409 ATF7IPQ6VMQ6 1270 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 CDC37L1Q7L3B6 337 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 ZNF804AQ7Z570 1209 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 ZNF467Q7Z7K2 595 aaPredicted RBP9.43□□□□□ -0.9
LINC00640-201ENST00000554409 VGLL2Q8N8G2 317 aa9.43□□□□□ -0.9
LINC00640-201ENST00000554409 RASSF10A6NK89 507 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 FKBP1AP62942 108 aaKnown RBP9.42□□□□□ -0.9
LINC00640-201ENST00000554409 LRRC24Q50LG9 513 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 CST9Q5W186 159 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 TTLL5Q6EMB2 1281 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 GLIS2Q9BZE0 524 aaPredicted RBP9.42□□□□□ -0.9
LINC00640-201ENST00000554409 MYOZ2Q9NPC6 264 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 MYH13Q9UKX3 1938 aa9.42□□□□□ -0.9
LINC00640-201ENST00000554409 CEP350Q5VT06 3117 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 PITPNM2Q9BZ72 1349 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 TRAF5O00463 557 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 PLIN1O60240 522 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 PDE8BO95263 885 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 GNAI3P08754 354 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 GTF2IP78347 998 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 PTPN12Q05209 780 aaKnown RBP9.41□□□□□ -0.9
LINC00640-201ENST00000554409 FMR1Q06787 632 aaKnown RBP eCLIP9.41□□□□□ -0.9
LINC00640-201ENST00000554409 ZKSCAN2Q63HK3 967 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 IFNL1Q8IU54 200 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 KLHDC4Q8TBB5 520 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 DCPSQ96C86 337 aaKnown RBP9.41□□□□□ -0.9
LINC00640-201ENST00000554409 MEIS3Q99687 375 aa9.41□□□□□ -0.9
LINC00640-201ENST00000554409 LRRFIP2Q9Y608 721 aaKnown RBP9.41□□□□□ -0.9
LINC00640-201ENST00000554409 FAM205AQ6ZU69 1335 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 EYA2O00167 538 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 CIAO1O76071 339 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 SASH1O94885 1247 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 FGFR2P21802 821 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 MTX1Q13505 466 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 SCARF1Q14162 830 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 METTL24Q5JXM2 366 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 RBM26Q5T8P6 1007 aaKnown RBP9.4□□□□□ -0.9
LINC00640-201ENST00000554409 KRT26Q7Z3Y9 468 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 OGFOD1Q8N543 542 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 TDRD7Q8NHU6 1098 aaKnown RBP9.4□□□□□ -0.9
LINC00640-201ENST00000554409 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
LINC00640-201ENST00000554409 FBXW7Q969H0 707 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 HHIPL1Q96JK4 782 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 MXD3Q9BW11 206 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 GGA3Q9NZ52 723 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 MKRN1Q9UHC7 482 aaKnown RBP9.4□□□□□ -0.9
LINC00640-201ENST00000554409 TNNQ9UQP3 1299 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 TLL2Q9Y6L7 1015 aa9.4□□□□□ -0.9
LINC00640-201ENST00000554409 CELF2O95319 508 aaKnown RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 HIBADHP31937 336 aaKnown RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 TIE1P35590 1138 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 VEGFBP49765 207 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 PUM3Q15397 648 aaKnown RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 ATG9AQ7Z3C6 839 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 FBXO33Q7Z6M2 555 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 SAPCD2Q86UD0 394 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 USP48Q86UV5 1035 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 CERS5Q8N5B7 392 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 ZBED3Q96IU2 234 aaPredicted RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 FAM84BQ96KN1 310 aaPredicted RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 COPRSQ9NQ92 184 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 HDAC9Q9UKV0 1011 aa9.39□□□□□ -0.91
LINC00640-201ENST00000554409 ABT1Q9ULW3 272 aaKnown RBP9.39□□□□□ -0.91
LINC00640-201ENST00000554409 ASTN2O75129 1339 aaPredicted RBP9.38□□□□□ -0.91
LINC00640-201ENST00000554409 PAPPA2Q9BXP8 1791 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 ADM5C9JUS6 153 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 WNT10BO00744 389 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 IFIT1P09914 478 aaKnown RBP9.38□□□□□ -0.91
LINC00640-201ENST00000554409 GYG1P46976 350 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 CAVIN4Q5BKX8 364 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 ANGEL2Q5VTE6 544 aaKnown RBP9.38□□□□□ -0.91
LINC00640-201ENST00000554409 KIAA0825Q8IV33 1275 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 SULF1Q8IWU6 871 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 TMEM57Q8N5G2 664 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 MTMR14Q8NCE2 650 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 CLUAP1Q96AJ1 413 aa9.38□□□□□ -0.91
LINC00640-201ENST00000554409 COL1A1P02452 1464 aaPredicted RBP9.38□□□□□ -0.91
LINC00640-201ENST00000554409 WDR33Q9C0J8 1336 aaKnown RBP9.37□□□□□ -0.91
LINC00640-201ENST00000554409 GNAI2P04899 355 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 SLC5A1P13866 664 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 IL15P40933 162 aaPredicted RBP9.37□□□□□ -0.91
LINC00640-201ENST00000554409 ECE1P42892 770 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 NBPF9Q3BBW0 867 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 DZIP1LQ8IYY4 767 aaKnown RBP9.37□□□□□ -0.91
LINC00640-201ENST00000554409 LPIN2Q92539 896 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 CDCA5Q96FF9 252 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 PCDHB8Q9UN66 801 aa9.37□□□□□ -0.91
LINC00640-201ENST00000554409 SRGAP3O43295 1099 aa9.36□□□□□ -0.91
LINC00640-201ENST00000554409 ECM2O94769 699 aaPredicted RBP9.36□□□□□ -0.91
LINC00640-201ENST00000554409 MFSD14BQ5SR56 506 aa9.36□□□□□ -0.91
LINC00640-201ENST00000554409 DLK2Q6UY11 383 aa9.36□□□□□ -0.91
LINC00640-201ENST00000554409 VPS37DQ86XT2 251 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms